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Protein Overview: kat-60L1-PA, kat...

General Information:
Name(s) found: kat-60L1-PF / FBpp0289963 [FlyBase]
kat-60L1-PA / FBpp0078276 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • The gene katanin p60-like 1 is referred to in FlyBase by the symbol Dmel\kat-60L1 (CG1193, FBgn0037375). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1607484..1613187. It has the cytological map location 83C3-83C4. Based on sequence similarity, it is predicted to have molecular function</span>: ATPase activity; microtubule binding. There is experimental evidence that it is involved in the biological process</span>: neuron remodeling. 4 alleles are reported. No phenotypic data is available. It has 8 annotated transcripts and 8 annotated polypeptides. [FlyBase]
  • The gene katanin p60-like 1 is referred to in FlyBase by the symbol Dmel\kat-60L1 (CG1193, FBgn0037375). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1607484..1613187. It has the cytological map location 83C3-83C4. Based on sequence similarity, it is predicted to have molecular function</span>: ATPase activity; microtubule binding. There is experimental evidence that it is involved in the biological process</span>: neuron remodeling. 4 alleles are reported. No phenotypic data is available. It has 8 annotated transcripts and 8 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: katanin complex [ISS]
    endoplasmic reticulum [ISS]
    microtubule associated complex [ISS]
    Biological Process: microtubule severing [ISS]
    neuron remodeling [IMP]
    microtubule-based process [ISS]
    Molecular Function: ATPase activity [ISS]
    ATP binding [IEA]
    microtubule binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVEEATYRR TTREKIVLRG NTTIRTVDST STYLPVMSPA GSSTPPTSLS HMARMMDSLI  60
   61 LDSLSPFGFT KITATSRPSR NASLKKSSEG GHSSTAERHR PVNNLGSNAP GGLGIGGSVP 120
  121 LRSKQRLPTQ EVAPQPRASQ TAQMPFPSQQ QDNRWVSSLR RRDPELQPTL PSINSNANSS 180
  181 SLSQSHHGSA GNVGLAGAGA PTPAASMGTM RLGRPARASA MTAALRKSRS VERLRARKLS 240
  241 TNTQLNLKHK PVKKNSLDEN SNSDDQDATT SLEDNSHAQS LATSHNTPKC SPKTKAKHFS 300
  301 PLGYEVHLVD TLEKDILQRH PCIKWTDVAG LNEAKTILQE AVVLPVIMPE FFKGIRRPWR 360
  361 GVLMVGPPGT GKTMLAKAVA TECGTTFFNV SSSTLTSKYR GESEKLVRLL FEMARFYAPS 420
  421 TIFIDEIDAL CASRGSDSEH EASRRFKAEL LIQMDGLNAS MQEEKVIMVL AATNHPWDID 480
  481 EAFRRRFEKR IYIPLPNEGT RSALLKLCLK DVCLSPSLNT GIIGDELQGY SGSDISNVCR 540
  541 DASMMAMRRL ISGRTPDQIK QIRREEVDQP ITLQDFQDAR LRTKKSVSAD DVARFEKWME 600
  601 EYGSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..605] PSI-BLAST 113.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle