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View Structure Prediction Details

Protein: kat-60L1-PA, kat...
Organism: Drosophila melanogaster
Length: 605 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kat-60L1-PA, kat....

Description E-value Query
Range
Subject
Range
Y1297_ARCFU - Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 ...
Y1297_ARCFU, YC9... - (O28972) Cell division cycle protein 48 homolog AF1297, Cell division cycle protein 48 homolog AF_12...
447.0 [0..87] [602..193]

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Predicted Domain #1
Region A:
Residues: [1-605]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVEEATYRR TTREKIVLRG NTTIRTVDST STYLPVMSPA GSSTPPTSLS HMARMMDSLI  60
   61 LDSLSPFGFT KITATSRPSR NASLKKSSEG GHSSTAERHR PVNNLGSNAP GGLGIGGSVP 120
  121 LRSKQRLPTQ EVAPQPRASQ TAQMPFPSQQ QDNRWVSSLR RRDPELQPTL PSINSNANSS 180
  181 SLSQSHHGSA GNVGLAGAGA PTPAASMGTM RLGRPARASA MTAALRKSRS VERLRARKLS 240
  241 TNTQLNLKHK PVKKNSLDEN SNSDDQDATT SLEDNSHAQS LATSHNTPKC SPKTKAKHFS 300
  301 PLGYEVHLVD TLEKDILQRH PCIKWTDVAG LNEAKTILQE AVVLPVIMPE FFKGIRRPWR 360
  361 GVLMVGPPGT GKTMLAKAVA TECGTTFFNV SSSTLTSKYR GESEKLVRLL FEMARFYAPS 420
  421 TIFIDEIDAL CASRGSDSEH EASRRFKAEL LIQMDGLNAS MQEEKVIMVL AATNHPWDID 480
  481 EAFRRRFEKR IYIPLPNEGT RSALLKLCLK DVCLSPSLNT GIIGDELQGY SGSDISNVCR 540
  541 DASMMAMRRL ISGRTPDQIK QIRREEVDQP ITLQDFQDAR LRTKKSVSAD DVARFEKWME 600
  601 EYGSC

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Detection Method: PSI-BLAST
Confidence: 113.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle