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Protein Overview: CG2100-PB, CG2100-PA

General Information:
Name(s) found: CG2100-PB / FBpp0290789 [FlyBase]
CG2100-PA / FBpp0078373 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG2100 (CG2100, FBgn0037369). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1560420..1562118. It has the cytological map location 83C1. Based on sequence similarity, it is predicted to have molecular function</span>: polynucleotide adenylyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: RNA processing. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG2100 (CG2100, FBgn0037369). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1560420..1562118. It has the cytological map location 83C1. Based on sequence similarity, it is predicted to have molecular function</span>: polynucleotide adenylyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: RNA processing. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA processing [IEA]
    Molecular Function: RNA binding [IEA]
    polynucleotide adenylyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGPSLLVKL TTRAFLLFNG RPQNRWLKSM ANSMVCSRGV SPELIAQLGK PPRMRTNPAF  60
   61 RKVATPEFKS IFTPELNDLV ALFKKYDYEL RIAGGAVRDI LMGIPPKDID LATTATPDQM 120
  121 KQMFEKEEVR MINANGEKHG TITPRINDKE NFEVTTLRID IRTDGRHAEV MYTTDWQLDA 180
  181 NRRDLTINSM FLGFDGTVYD YFYGYDDLQE RRVVFVGEAD IRIKEDFLRI LRYFRFYGRI 240
  241 ASEENNHDKA TLAAIKENAK GLARISGERI WSELQKIVPG NFGAALFLEM HRCNLFEYIG 300
  301 LPKEPYLDEF DRLCKALDQF EKPHQPILYL AGMLHSVEDA MEMHKRLKLS AYERDLARFI 360
  361 TQEREKVGSQ YTTLRDYQKL CLQKYIQRDF VEQLLKYSGK LELYNQLKSW VKPDFPIRGN 420
  421 ALAQRGLNGM RLGLVMDELK LLWADSDFQL THDDLLKWIP NVLKKIPSAP GKVKRMK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..477] PSI-BLAST 96.0 tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tRNA binding
    		•  1.96218336722441 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.28424599869932 bayes_pls_golite062009
  • RNA binding
    		•  1.26469116227089 bayes_pls_golite062009
  • tRNA nucleotidyltransferase activity
    		•  1.05100814747368 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.909120817238637 bayes_pls_golite062009
  • binding
    		•  0.903714723880344 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.85021422477192 bayes_pls_golite062009
  • catalytic activity
    		•  0.75232920999699 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.747086661208511 bayes_pls_golite062009
  • transferase activity
    		•  0.432029324907561 bayes_pls_golite062009
  • DNA binding
    		•  0.329185456594284 bayes_pls_golite062009
  • protein binding
    		•  0.140876926470268 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle