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Protein Overview: CG12170-PA

General Information:
Name(s) found: CG12170-PA / FBpp0078358 [FlyBase]
Description(s) found:
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  • gi|7296703|gb|AAF51982.1| CG12170 [Drosophila melanogaster] [NCBI NR]
  • gi|24644341|ref|NP_649565.1| CG12170 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12170 (CG12170, FBgn0037356). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1462959..1464379. It has the cytological map location 83B7. Based on sequence similarity, it is predicted to have molecular function</span>: 3-oxoacyl-[acyl-carrier-protein] synthase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein amino acid phosphorylation; biosynthetic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12170-PA translation from_gene[CG12170 CG12170 FBgn0037356] seq_release:3 mol_weight=46379 cds_boundaries:(3R:1,462,985..1,464,298[+]) aa_length:438 transcript_info:[CG12170-RA seq_release:3] gene_info:[gene symbol:CG12170 FBgn0037356 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VNF5) CG12170 protein [DrosMelano7227.FASTAC.txt]
  • (AE003602) CG12170 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG12170-PA [Drosophila melanogaster]gi|24644341|ref|NP_649565.1| CG12170-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:1462988..1464304; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982; MD5=39ec64576c159dd4ec28ff7bac [fly-100309-contam.fasta]
  • CG12170-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:1462988..1464304; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:1462988..1464304; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • 3-oxoacyl-[acyl-carrier-protein] synthase OS=Drosophila melanogaster GN=CG12170 PE=3 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:1462988..1464304; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982,FlyMine:FBpp0078358,modMine:FBpp0078358; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:5637266..5638582; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982,FlyMine:FBpp0078358,modMine:FBpp0078358; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:5637266..5638582; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982,FlyMine:FBpp0078358,modMine:FBpp0078358; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • 3-oxoacyl-[acyl-carrier-protein] synthase OS=Drosophila melanogaster GN=CG12170 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0078358 type=protein; loc=3R:5637266..5638582; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982,FlyMine:FBpp0078358,modMine:FBpp0078358; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:5637266..5638582; ID=FBpp0078358; name=CG12170-PA; parent=FBgn0037356,FBtr0078709; dbxref=FlyBase:FBpp0078358,FlyBase_Annotation_IDs:CG12170-PA,GB_protein:AAF51982.1,REFSEQ:NP_649565,GB_protein:AAF51982,UniProt/TrEMBL:Q9VNF5,FlyMine:FBpp0078358,modMine:FBpp0078358; MD5=39ec64576c159dd4ec28ff7bac1a86d5; length=438; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biosynthetic process [IEA]
    protein amino acid phosphorylation [IEA]
    Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity [ISS]
    ATP binding [IEA]
    protein kinase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLGKCTVL VRQTRSLSTP SGRRRVVVTG SGAVTPLGNN GPDSWRRILA GESAISRLSA  60
   61 EFKGLPCQVA AQIPRENLQL DQHLTKSDIK LMSPATQLAV LAAEEALSTG KLCPKQLSEE 120
  121 ELERFGVCVG MGMFDLAEVY GAWNQLQRGY NRVSPFFVPR LLPSMACGHI SMRHGLRGPN 180
  181 HSVSTACATG AHALGDAMRF IRSGDADLML AGSGEACIDP LSIAGFCRLR ALSTAFNDNP 240
  241 AVASRPFDKS RDGFVMGEGA AVLLLEELEH ARARGAPILA EILGYGLSGD AYHITSPSDD 300
  301 GAGATLAMKR AIQDAGIAPE DVTYVNAHAT STPTGDRIES HAIGRVFGAH TPQVRVSSTK 360
  361 GAHGHLLGSS GNLEALFVVL ACANNKLPPS INIEHLDVDV NVVTKATDWS ADQKRRVALK 420
  421 NSFGFGGTNA SLCIASYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..438] PSI-BLAST 101.0 Structure of mitochondrial beta-ketoacyl synthase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle