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View Structure Prediction Details

Protein: CG12170-PA
Organism: Drosophila melanogaster
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12170-PA.

Description E-value Query
Range
Subject
Range
gi|186465829, gi... - gi|23126914|ref|ZP_00108795.1| COG3321: Polyketide synthase modules and related proteins [Nostoc pun...
484.0 [0..1] [436..15]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLGKCTVL VRQTRSLSTP SGRRRVVVTG SGAVTPLGNN GPDSWRRILA GESAISRLSA  60
   61 EFKGLPCQVA AQIPRENLQL DQHLTKSDIK LMSPATQLAV LAAEEALSTG KLCPKQLSEE 120
  121 ELERFGVCVG MGMFDLAEVY GAWNQLQRGY NRVSPFFVPR LLPSMACGHI SMRHGLRGPN 180
  181 HSVSTACATG AHALGDAMRF IRSGDADLML AGSGEACIDP LSIAGFCRLR ALSTAFNDNP 240
  241 AVASRPFDKS RDGFVMGEGA AVLLLEELEH ARARGAPILA EILGYGLSGD AYHITSPSDD 300
  301 GAGATLAMKR AIQDAGIAPE DVTYVNAHAT STPTGDRIES HAIGRVFGAH TPQVRVSSTK 360
  361 GAHGHLLGSS GNLEALFVVL ACANNKLPPS INIEHLDVDV NVVTKATDWS ADQKRRVALK 420
  421 NSFGFGGTNA SLCIASYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2c9hA
Description: Structure of mitochondrial beta-ketoacyl synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle