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Protein Overview: CG9772-PB

General Information:
Name(s) found: CG9772-PB / FBpp0078592 [FlyBase]
Description(s) found:
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  • gi|28573252|ref|NP_730816.2| CG9772, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|28381117|gb|AAF52144.2| CG9772, isoform B [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9772 (CG9772, FBgn0037236). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:161143..165287. It has the cytological map location 82A4. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: ubiquitin-dependent protein catabolic process. 4 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • >CG9772-PB translation from_gene[CG9772 CG9772 FBgn0037236] seq_release:3 mol_weight=64307 cds_boundaries:(3R:161,267..165,212[-]) aa_length:581 transcript_info:[CG9772-RB seq_release:3] gene_info:[gene symbol:CG9772 FBgn0037236 gene_boundaries:(3R:161 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q7YZ95) CG9772-PB [DrosMelano7227.FASTAC.txt]
  • CG9772-PB, isoform B [Drosophila melanogaster]gi|28573252|ref|NP_730816.2| CG9772-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(161265..161451,161508..161667,161731..162130,162191..163064,165089..165213); ID=FBpp0078592; name=CG9772-PB; parent=FBgn0037236,FBtr0078952; dbxref=FlyBase:FBpp0078592,FlyBase_Annotation_IDs:CG9772-PB,GB_protein:AAF52144.2, [fly-100309-contam.fasta]
  • CG9772-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(161265..161451,161508..161667,161731..162130,162191..163064,165089..165213); ID=FBpp0078592; name=CG9772-PB; parent=FBgn0037236,FBtr0078952; dbxref=FlyBase:FBpp0078592,FlyBase_Annotation_IDs:CG9772-PB,GB_protein:AAF52144.2,REFSEQ:NP_730816,GB_protein:AAF52144; MD5=ce361c5777c3f7e06862dad7de4476a0; length=581; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(161265..161451,161508..161667,161731..162130,162191..163064,165089..165213); ID=FBpp0078592; name=CG9772-PB; parent=FBgn0037236,FBtr0078952; dbxref=FlyBase:FBpp0078592,FlyBase_Annotation_IDs:CG9772-PB,GB_protein:AAF52144.2,REFSEQ:NP_730816,GB_protein:AAF52144; MD5=ce361c5777c3f7e06862dad7de4476a0; length=581; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG9772, isoform B OS=Drosophila melanogaster GN=CG9772-RB PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(161265..161451,161508..161667,161731..162130,162191..163064,165089..165213); ID=FBpp0078592; name=Skp2-PB; parent=FBgn0037236,FBtr0078952; dbxref=FlyBase:FBpp0078592,FlyBase_Annotation_IDs:CG9772-PB,GB_protein:AAF52144.2,REFSEQ:NP_730816,GB_protein:AAF52144,FlyMine:FBpp0078592,modMine:FBpp0078592; MD5=ce361c5777c3f7e06862dad7de4476a0; length=581; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG9772, isoform B OS=Drosophila melanogaster GN=CG9772-RB PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 581 amino acids

    Gene Ontology:
    Cellular Component: SCF ubiquitin ligase complex [ISS]
    Biological Process: ubiquitin-dependent protein catabolic process [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLFLSSHG ASRHWRLRRP SRWAYNRMAI FSSTTTVDTT TRKRSTNKNH VSVVGALVST  60
   61 TKSSHYEHPS SPSALTFEAL EEMGIGMLDS EESSSSALSA IALAVSATSD DNSNETTPCA 120
  121 SVSRMAHQLQ HTQRLSLGST GDITLDSPAV EDSLSMSRQS AEKLQILAQA KRSSLGSEGS 180
  181 GNSNSPSKRL RNPLAAVTCN NQIDGTASLN FQPSTSRLAQ VRQAKKPSTT NITTRIVAAD 240
  241 SFFVFRTPAM SAHINSGINY FERLSDEILL DIFKWLPKKT LLRMATVCRR FNRCSRDETL 300
  301 WTRLDLGLRT IRPGALEQIV RRGVLVIRLA QTSIQEPAFA PYTEVFRTRL QYLDLSMASI 360
  361 TRSSLLTLLS HCRQLKKISL ENIELDDDIC AEIAKNEALE AVNLTMASGL TSNSVRLMME 420
  421 SLTSLSSLNI SWTDLSADAV TALVTHISPN LIRLNIAGCR RVLFDSHVAT LQKRCPQLLE 480
  481 LDLSDCNSLT PTVITAIMKF KMLEYLSVSR CYLIPATKFI ELKSMPSLTY LDIFGMLSDT 540
  541 AMEVLEKQLP KMGINKFIHS SVSRPTVGTR RTSIWGLRTR D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] deduced N/A No confident structure predictions are available.
    2 View Details [143..275] PSI-BLAST 15.522879 No description for 2omzA was found.
    3 View Details [276..581] PSI-BLAST 21.09691 Skp2; Cyclin A/CDK2-associated p19, Skp2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle