Protein Overview: croc-PA

General Information:
Name(s) found:	croc-PA / FBpp0078049 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|7296440\|gb\|AAF51727.1\| crocodile [Drosophila melanogaster] [NCBI NR] gi\|2506416\|sp\|P32027.2\|CROC_DROME RecName: Full=Fork head domain-containing protein crocodile; AltName: Full=FKH protein FD1 [NCBI NR] gi\|25012922\|gb\|AAN71548.1\| RH24787p [Drosophila melanogaster] [NCBI NR] pir\|\|S59870 fork head domain protein crocodile - fruit fly (Drosophila melanogaster) [NCBI NR] gi\|17975538\|ref\|NP_524202.1\| crocodile [Drosophila melanogaster] [NCBI NR] gi\|1245868\|gb\|AAB35643.1\| crocodile [Drosophila melanogaster] [NCBI NR] Fork head domain-containing protein crocodile OS=Drosophila melanogaster GN=croc PE=2 SV=2 [Swiss-Prot] The gene crocodile is referred to in FlyBase by the symbol Dmel\croc (CG5069, FBgn0014143). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:21467135..21469656. It has the cytological map location 78D3. There is experimental evidence that it has the molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: specification of segmental identity, head. 7 alleles are reported. The phenotypes of these alleles are annotated with: stomatogastric nervous system; labral nerve; embryonic labral segment; embryonic intercalary segment; pharyngeal monoscolopidial chordotonal organ; dorsopharyngeal organ; adult labral sense organ; embryonic antennal segment. It has one annotated transcript and one annotated polypeptide. [FlyBase] >CG5069-PA translation from_gene[CG5069 croc FBgn0014143] seq_release:3 mol_weight=54517 cds_boundaries:(3L:21,391,947..21,393,470[-]) aa_length:508 transcript_info:[CG5069-RA seq_release:3] gene_info:[gene symbol:croc FBgn0014143 gene_boundaries:(3L:2 [hmr_yeast5_DM3-1_pombe.fasta] (P32027) Fork head domain protein crocodile (FKH protein FD1) [DrosMelano7227.FASTAC.txt] (AE003594) croc gene product [Drosophila melanogaster] [yeastflysequest.fasta] CG5069-PA [Drosophila melanogaster]gi\|1245868\|gb\|AAB35643.1\| crocodile [Drosophila melanogaster]gi\|17975538\|ref\|NP_524202.1\| CG5069-PA [Drosophila melanogaster]gi\|25012922\|gb\|AAN71548.1\| RH24787p [Drosophila melanogaster]gi\|2133660\|pir\|\|S59870 fork he [nrdb_11152004_Chlamydomonas] type=protein; loc=3L:complement(21467768..21469294); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727; MD5=dee71b796e7dc89d [fly-100309-contam.fasta] crocodile [Drosophila melanogaster] [nr-271106-contam.fasta] RH24787p [Drosophila melanogaster] [nr-271106-contam.fasta] CG5069-PA [Drosophila melanogaster] [nr-271106-contam.fasta] Fork head domain-containing protein crocodile (FKH protein FD1) [nr-271106-contam.fasta] crocodile CG5069-PA [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=3L:complement(21467768..21469294); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:complement(21467768..21469294); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] RH24787p OS=Drosophila melanogaster GN=croc PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=3L:complement(21467768..21469294); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727,FlyMine:FBpp0078049,modMine:FBpp0078049; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=3L:complement(21474668..21476194); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727,FlyMine:FBpp0078049,modMine:FBpp0078049; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=3L:complement(21474668..21476194); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727,FlyMine:FBpp0078049,modMine:FBpp0078049; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] FBpp0078049 type=protein; loc=3L:complement(21474668..21476194); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727,FlyMine:FBpp0078049,modMine:FBpp0078049; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=3L:complement(21474668..21476194); ID=FBpp0078049; name=croc-PA; parent=FBgn0014143,FBtr0078395; dbxref=FlyBase:FBpp0078049,FlyBase_Annotation_IDs:CG5069-PA,GB_protein:AAF51727.1,REFSEQ:NP_524202,GB_protein:AAF51727,UniProt/Swiss-Prot:P32027,FlyMine:FBpp0078049,modMine:FBpp0078049; MD5=dee71b796e7dc89d7c25c217577dabe5; length=508; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	508 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA][NAS]
Biological Process:	specification of segmental identity, head [IMP][NAS] regulation of transcription, DNA-dependent [IEA]
Molecular Function:	DNA binding [IDA][NAS] transcription factor activity [IEA] RNA polymerase II transcription factor activity [ISS][NAS] sequence-specific DNA binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTLFSDQNS FTRHYAQTAA GYGSASAVAA ASSASAAAAA HYAYDQYSRY PYSASAYGLG  60
   61 APHQNKEIVK PPYSYIALIA MAIQNAADKK VTLNGIYQYI MERFPYYRDN KQGWQNSIRH 120
  121 NLSLNECFVK VARDDKKPGK GSYWTLDPDS YNMFDNGSFL RRRRRFKKKD VMREKEEAIK 180
  181 RQAMMNEKLA EMKPLKLMTN GILEAKHMAA HAAHFKKEPL MDLGCLSGKE VSHAAMLNSC 240
  241 HDSLAQMNHL AGGGVEHPGF TVDSLMNVYN PRIHHSAYPY HLNEDNLATV ASSQMHHVHH 300
  301 AAAAHHAQQL QRHVAHVAHP LTPGGQGAGG QSSGHSPTTI STPHGPAHGG WYTPETPPSE 360
  361 PVPHNGQQGT PTHPGHNNNN SSSVLNHNGV GNGGGGGGGG GGGSSSVLTS SPTSALGFRD 420
  421 MIFEQNQSCQ LDTGSPTGSL QSASPPASAS VAAASAAAAA AVISSHHHHH HHHAALSGNL 480
  481 GQLGQLSNLS HYRPHVGHYQ EYGIKYGV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: croc-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: