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Protein Overview: CG5665-PA

General Information:
Name(s) found: CG5665-PA / FBpp0077840 [FlyBase]
Description(s) found:
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  • gi|7296289|gb|AAF51579.1| CG5665 [Drosophila melanogaster] [NCBI NR]
  • gi|24667407|ref|NP_649213.1| CG5665 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5665 (CG5665, FBgn0036977). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:20351936..20352920. It has the cytological map location 77B5-77B6. Based on sequence similarity, it is predicted to have molecular function</span>: lipoprotein lipase activity; structural molecule activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: lipid metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5665-PA translation from_gene[CG5665 CG5665 FBgn0036977] seq_release:3 mol_weight=32429 cds_boundaries:(3L:20,277,374..20,278,355[+]) aa_length:291 transcript_info:[CG5665-RA seq_release:3] gene_info:[gene symbol:CG5665 FBgn0036977 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VPH3) CG5665 protein [DrosMelano7227.FASTAC.txt]
  • (AE003591) CG5665 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5665-PA [Drosophila melanogaster]gi|24667407|ref|NP_649213.1| CG5665-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(20351936..20352136,20352189..20352324,20352382..20352920); ID=FBpp0077840; name=CG5665-PA; parent=FBgn0036977,FBtr0078182; dbxref=FlyBase:FBpp0077840,FlyBase_Annotation_IDs:CG5665-PA,GB_protein:AAF51579.1,REFSEQ:NP_649213,GB_prot [fly-100309-contam.fasta]
  • CG5665-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(20351936..20352136,20352189..20352324,20352382..20352920); ID=FBpp0077840; name=CG5665-PA; parent=FBgn0036977,FBtr0078182; dbxref=FlyBase:FBpp0077840,FlyBase_Annotation_IDs:CG5665-PA,GB_protein:AAF51579.1,REFSEQ:NP_649213,GB_protein:AAF51579; MD5=67699fbfc759849225a78e7361e1fc4f; length=291; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(20351936..20352136,20352189..20352324,20352382..20352920); ID=FBpp0077840; name=CG5665-PA; parent=FBgn0036977,FBtr0078182; dbxref=FlyBase:FBpp0077840,FlyBase_Annotation_IDs:CG5665-PA,GB_protein:AAF51579.1,REFSEQ:NP_649213,GB_protein:AAF51579; MD5=67699fbfc759849225a78e7361e1fc4f; length=291; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5665 OS=Drosophila melanogaster GN=CG5665 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid metabolic process [IEA]
    Molecular Function: structural molecule activity [ISS]
    lipoprotein lipase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFQYMTPCQ NYSVPLLEAS KLWKHSRFSK GRKVVILATG WTNTVNESSA ISMISKAFMC  60
   61 RGDVNFVIVD AADYVDTFYA WSALNTDLIG EHIGVGLTHL IELTPLRNIH LIGHSLGAHI 120
  121 MGTAGRTFKK LTGKLIPRIT GLDPAKPCFR REKILPGLTR GDAKLVDIIH TNIGILAKRG 180
  181 PLGDVDFYPG GAHPIQPGCL TIGCSHTRAV EYFAESAYPH QEKNFMGKKC ASWDELRKRD 240
  241 CSAGIVSPMG YRMNPQARGI YYVDVNGWPP YGRNSENTVD PRLKTCYLCR R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..291] PSI-BLAST 66.0 Pancreatic lipase, C-terminal domain; Pancreatic lipase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle