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Protein Overview: kin17-PA

General Information:
Name(s) found: kin17-PA / FBpp0077839 [FlyBase]
Description(s) found:
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  • gi|7296288|gb|AAF51578.1| kin17 [Drosophila melanogaster] [NCBI NR]
  • gi|24667403|ref|NP_649212.2| kin17 [Drosophila melanogaster] [NCBI NR]
  • gi|201065593|gb|ACH92206.1| FI03293p [Drosophila melanogaster] [NCBI NR]
  • The gene kin17 is referred to in FlyBase by the symbol Dmel\kin17 (CG5649, FBgn0024887). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:20349909..20351444. It has the cytological map location 77B5. Based on sequence similarity, it is predicted to have molecular function</span>: nucleic acid binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5649-PA translation from_gene[CG5649 kin17 FBgn0024887] seq_release:3 mol_weight=45355 cds_boundaries:(3L:20,275,435..20,276,676[+]) aa_length:390 transcript_info:[CG5649-RA seq_release:3] gene_info:[gene symbol:kin17 FBgn0024887 gene_boundaries:(3L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VPH4) CG5649 protein [DrosMelano7227.FASTAC.txt]
  • (AE003591) kin17 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5649-PA [Drosophila melanogaster]gi|24667403|ref|NP_649212.2| CG5649-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(20349997..20350968,20351041..20351241); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578; MD5=9c [fly-100309-contam.fasta]
  • kin17 CG5649-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5649-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(20349997..20350968,20351041..20351241); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(20349997..20350968,20351041..20351241); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • FI03293p OS=Drosophila melanogaster GN=kin17 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(20349997..20350968,20351041..20351241); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578,FlyMine:FBpp0077839,modMine:FBpp0077839; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • FI03293p OS=Drosophila melanogaster GN=kin17 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:join(20356897..20357868,20357941..20358141); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578,FlyMine:FBpp0077839,modMine:FBpp0077839; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(20356897..20357868,20357941..20358141); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578,FlyMine:FBpp0077839,modMine:FBpp0077839; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0077839 type=protein; loc=3L:join(20356897..20357868,20357941..20358141); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578,FlyMine:FBpp0077839,modMine:FBpp0077839; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(20356897..20357868,20357941..20358141); ID=FBpp0077839; name=kin17-PA; parent=FBgn0024887,FBtr0078181; dbxref=FlyBase:FBpp0077839,FlyBase_Annotation_IDs:CG5649-PA,GB_protein:AAF51578.1,REFSEQ:NP_649212,GB_protein:AAF51578,UniProt/TrEMBL:Q9VPH4,FlyMine:FBpp0077839,modMine:FBpp0077839; MD5=9c03768d60b86a53c7a6ba97c770ee97; length=390; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: precatalytic spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: nucleic acid binding [ISS]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAEVGTPK YLANKMKSKG LQKLRWYCQM CEKQCRDENG FKCHTMSESH QRQLLLFADN  60
   61 PGKFLHSFSK EFSDGYMELL RRRFGTKRTS ANKIYQEYIA HKEHIHMNAT RWLTLSDYVK 120
  121 WLGRTGQVIA DETEKGWFVT YIDRSPEAME RQAKADRKEK MEKDDEERMA DFIEQQIKNA 180
  181 KAKDGEEDEG QEKFTELKRE ENEPLKLDIR LEKKFQPDTV LGKSALAKRP APEAEEKVFK 240
  241 KPKSVAGDSQ TRSVLDEIIK QEESKKERAN RKDYWLHKGI VVKFISKSMG EKFFKQKAVV 300
  301 LDVIDRYQGK IKFLETGEKL KVDQAHLETV IPALDKPVMV VNGAYRGSEA LLRKLDERRY 360
  361 SVSVEILHGP LKGRIVDNVQ YEDISKLHGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle