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Protein Overview: CG10419-PA, FBpp...

General Information:
Name(s) found: FBpp0303126 [FlyBase]
CG10419-PA / FBpp0074799 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=3L:complement(19092581..19093102,19093154..19093369); ID=FBpp0303126; name=Gem2-PB; parent=FBgn0036850,FBtr0330093; dbxref=FlyBase:FBpp0303126,FlyBase_Annotation_IDs:CG10419-PB,REFSEQ:NP_001262034,GB_protein:AGB94727; MD5=c48df1b111dc77ecbcbd237dddce375b; length=245; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10419 (CG10419, FBgn0036850). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:19092219..19093434. It has the cytological map location 75F7. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: spliceosome assembly. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: spliceosome assembly [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHEPEDQTF QLQALEICEP DSSFDPQKPP ESGEEYLMHM FYERKRCPAV VTKRSSKIRN  60
   61 NTGNTTLEML DNPELPPFKC LLPTPEWRDE QVKSFQAARS QVLVLRKELA NNNYDQSGEP 120
  121 PLTSDQEKWK EFCRNQQPLL STLLHLTQND LELLLEMLSK WLQDPNTTVD LLHDVWLARW 180
  181 LYATLVCLHL PLEPHVFSTL RYIARTCIHL RNQLKEDEVQ RAAPYNLLLT LTVQVFAQND 240
  241 FKDYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] deduced N/A No confident structure predictions are available.
    2 View Details [125..245] MSA 4.029991 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle