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Protein Overview: PDCD-5-PA

General Information:
Name(s) found: PDCD-5-PA / FBpp0075238 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • The gene PDCD-5 is referred to in FlyBase by the symbol Dmel\PDCD-5 (CG13072, FBgn0036580). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:16224181..16225132. It has the cytological map location 72D10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: DNA binding. It is reported to be involved in the biological process</span>: apoptosis. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 133 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: apoptosis [NAS]
    Molecular Function: DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSDLDALR AQRMSQMQSQ FGGGNDAEKQ QAQQEQMRAQ EEMKHSILSQ VLDQQARARL  60
   61 NTLKVSKPEK AQMFENMVIR MAQMGQVRGK LDDAQFVSIL ESVNAQMPQS KSSVKYDRRR 120
  121 AAIDSDDDED YGC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 26.69897 Solution structure of programmed cell death 5


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle