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Protein Overview: mRpL20-PA

General Information:
Name(s) found: mRpL20-PA / FBpp0075631 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene mitochondrial ribosomal protein L20 is referred to in FlyBase by the symbol Dmel\mRpL20 (CG11258, FBgn0036335). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:13010245..13010933. It has the cytological map location 69F5. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 150 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFLNLPLLV RSRGPDEFWR KRRIFKLAAH YRSRTRNVYS FAIRSVHRAL AYATKGRKLK  60
   61 KLDMAQLWST RVEAGCQQYG VGLETFKEGL ARSDILLNKK VLSDLAIWEP RSFEALVKIS 120
  121 RERAAVEGMP DIKRRSAFNQ VYGLSNLKLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] PSI-BLAST 36.154902 No description for 1vs6Q was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.97474791978241 bayes_pls_golite062009
  • structural molecule activity
    		•  9.40020164128852 bayes_pls_golite062009
  • binding
    		•  1.3135072239079 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.596788977988878 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle