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Protein Overview: CG5946-PA

General Information:
Name(s) found: CG5946-PA / FBpp0075811 [FlyBase]
Description(s) found:
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  • gi|7294666|gb|AAF50004.1| CG5946, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|25010068|gb|AAN71199.1| GH26062p [Drosophila melanogaster] [NCBI NR]
  • gi|24662938|ref|NP_729751.1| CG5946, isoform A [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5946 (CG5946, FBgn0036211). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:11810083..11815375. It has the cytological map location 68E1. Based on sequence similarity, it is predicted to have molecular function</span>: cytochrome-b5 reductase activity. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior. 12 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • >CG5946-PA translation from_gene[CG5946 CG5946 FBgn0036211] seq_release:3 mol_weight=35296 cds_boundaries:(3L:11,774,695..11,777,383[-]) aa_length:313 transcript_info:[CG5946-RA seq_release:3] gene_info:[gene symbol:CG5946 FBgn0036211 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003543) CG5946 gene product [alt 1] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5946-PA, isoform A [Drosophila melanogaster]gi|24662938|ref|NP_729751.1| CG5946-PA [Drosophila melanogaster]gi|25010068|gb|AAN71199.1| GH26062p [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(11810244..11810416,11811188..11811287,11811354..11812007,11812921..11812935); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1 [fly-100309-contam.fasta]
  • GH26062p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5946-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(11810244..11810416,11811188..11811287,11811354..11812007,11812921..11812935); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(11810244..11810416,11811188..11811287,11811354..11812007,11812921..11812935); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5946, isoform A OS=Drosophila melanogaster GN=zetaCOP PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(11810244..11810416,11811188..11811287,11811354..11812007,11812921..11812935); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004,FlyMine:FBpp0075811,modMine:FBpp0075811; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(join(11819821..11819835,11818254..11818907,11818088..11818187,11817144..11817316)); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004,FlyMine:FBpp0075811,modMine:FBpp0075811; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(11819821..11819835,11818254..11818907,11818088..11818187,11817144..11817316)); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004,FlyMine:FBpp0075811,modMine:FBpp0075811; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of X2JGK6, NADH-cytochrome b5 reductase OS=Drosophila melanogaster GN=zetaCOP PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0075811 type=protein; loc=3L:complement(join(11819821..11819835,11818254..11818907,11818088..11818187,11817144..11817316)); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004,FlyMine:FBpp0075811,modMine:FBpp0075811; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(11819821..11819835,11818254..11818907,11818088..11818187,11817144..11817316)); ID=FBpp0075811; name=CG5946-PA; parent=FBgn0036211,FBtr0076079; dbxref=FlyBase:FBpp0075811,FlyBase_Annotation_IDs:CG5946-PA,GB_protein:AAF50004.1,REFSEQ:NP_729751,GB_protein:AAF50004,UniProt/TrEMBL:Q9I7R1,FlyMine:FBpp0075811,modMine:FBpp0075811; MD5=be37058d9bdd4a03da04ff0b328eaab1; length=313; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 313 amino acids

    Gene Ontology:
    Cellular Component: COPI vesicle coat [NAS]
    Biological Process: phagocytosis, engulfment [IMP]
    oxidation reduction [IEA]
    inter-male aggressive behavior [IMP]
    Molecular Function: cytochrome-b5 reductase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEFDFVPLA VGVVAVLAGA LIVHYLLNKK STKPRREPNR TARLRTLVDP NDKYLLPLIE  60
   61 KENLSHDTRR FRFGLPSKQH VLGLPVGQHI HLIATIDNEL IIRPYTPISS DEDVGYVDLV 120
  121 VKVYFKDSHP KFPAGGKMTQ HLEQLELGDK ISFRGPSGRL QYLGNGTFSI KKLRKDPPKH 180
  181 VTAKRVNMIA GGTGITPMLQ LAREVLKRSD KDKTELALLF ANQSEKDILL RAELDELAQK 240
  241 HPDQFKIWYT VDKANEGWQY SVGFINEEMI AAHLLPAKDD TIVLLCGPPP MINFACNPAL 300
  301 DKLGYHPDTR FAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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