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Protein Overview: CG6272-PA, FBpp0...

General Information:
Name(s) found: FBpp0304952 [FlyBase]
CG6272-PA / FBpp0075963 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=3L:complement(11090742..11090972,11091100..11091210); ID=FBpp0304952; name=CG6272-PB; parent=FBgn0036126,FBtr0332706; dbxref=REFSEQ:NP_001261698,GB_protein:AGB94392,FlyBase:FBpp0304952,FlyBase_Annotation_IDs:CG6272-PB; MD5=3ee8bb72246e1b403d3d81ec16afb869; length=113; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6272 (CG6272, FBgn0036126). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:11090617..11091286. It has the cytological map location 68A6. Based on sequence similarity, it is predicted to have molecular function</span>: protein heterodimerization activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: regulation of transcription, DNA-dependent. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 113 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: transcription factor activity [IEA]
    protein heterodimerization activity [ISS]
    protein dimerization activity [IEA]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKKRTAAS TSKNSDSPLS PHTDDPAYKE KRKKNNEAVQ RTREKTKKSA EERKKRIDDL  60
   61 RKQNDALKVQ IETSEKHIST LRDLIIQGEK TEDGHRIIQE ILAEPDPDPK DND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 6.522879 C/ebp beta


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle