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Protein Overview: FBpp0309532, RpS...

General Information:
Name(s) found: FBpp0309532 [FlyBase]
RpS9-PD / FBpp0076154 [FlyBase]
RpS9-PA / FBpp0076152 [FlyBase]
Description(s) found:
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  • gi|7294919|gb|AAF50249.1| ribosomal protein S9, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|60416385|sp|P55935.2|RS9_DROME RecName: Full=40S ribosomal protein S9 [NCBI NR]
  • gi|254750749|gb|ACT80127.1| LD13662p [Drosophila melanogaster] [NCBI NR]
  • gi|24661711|ref|NP_729506.1| ribosomal protein S9, isoform D [Drosophila melanogaster] [NCBI NR]
  • gi|24661707|ref|NP_524004.2| ribosomal protein S9, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|23093773|gb|AAN11946.1| ribosomal protein S9, isoform D [Drosophila melanogaster] [NCBI NR]
  • 40S ribosomal protein S9 OS=Drosophila melanogaster GN=RpS9 PE=1 SV=2 [Swiss-Prot]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0309532; name=RpS9-PE; parent=FBgn0010408,FBtr0342577; dbxref=FlyBase:FBpp0309532,FlyBase_Annotation_IDs:CG3395-PE; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein S9 is referred to in FlyBase by the symbol Dmel\RpS9 (CG3395, FBgn0010408). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:9502990..9504642. It has the cytological map location 67B11. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 6 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG3395-PA translation from_gene[CG3395 RpS9 FBgn0010408] seq_release:3 mol_weight=22624 cds_boundaries:(3L:9,467,513..9,468,807[-]) aa_length:195 transcript_info:[CG3395-RA seq_release:3] gene_info:[gene symbol:RpS9 FBgn0010408 gene_boundaries:(3L:9,4 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG3395-PD translation from_gene[CG3395 RpS9 FBgn0010408] seq_release:3 mol_weight=22624 cds_boundaries:(3L:9,467,513..9,468,807[-]) aa_length:195 transcript_info:[CG3395-RD seq_release:3] gene_info:[gene symbol:RpS9 FBgn0010408 gene_boundaries:(3L:9,4 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VT06) RpS9 protein [DrosMelano7227.FASTAC.txt]
  • (AE003551) RpS9 gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3395-PD, isoform D [Drosophila melanogaster]gi|7294919|gb|AAF50249.1| CG3395-PA, isoform A [Drosophila melanogaster]gi|24661711|ref|NP_729506.1| CG3395-PD [Drosophila melanogaster]gi|24661707|ref|NP_524004.2| CG3395-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protei [fly-100309-contam.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protei [fly-100309-contam.fasta]
  • 40S ribosomal protein S9 [nr-271106-contam.fasta]
  • Ribosomal protein S9 CG3395-PD, isoform D [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Ribosomal protein S9 CG3395-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3395-PD, isoform D [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3395-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • LD13662p OS=Drosophila melanogaster GN=RpS9-RA PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(9503081..9503258,9503565..9503751,9504156..9504378); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946,FlyMine:FBpp0076154,modMine:FBpp0076154; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • 40S ribosomal protein S9 OS=Drosophila melanogaster GN=RpS9 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • ribosomal protein S9, isoform A [Drosophila melanogaster] [2012-10-yates-His-Tub4-plus-reversed.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946,FlyMine:FBpp0076154,modMine:FBpp0076154; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0309532; name=RpS9-PE; parent=FBgn0010408,FBtr0342577; dbxref=GB_protein:AHN58033,REFSEQ:NP_001287008,FlyBase:FBpp0309532,FlyBase_Annotation_IDs:CG3395-PE; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946,FlyMine:FBpp0076154,modMine:FBpp0076154; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0309532; name=RpS9-PE; parent=FBgn0010408,FBtr0342577; dbxref=GB_protein:AHN58033,REFSEQ:NP_001287008,FlyBase:FBpp0309532,FlyBase_Annotation_IDs:CG3395-PE; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P55935, LD13662p OS=Drosophila melanogaster GN=RpS9 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0076152 type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0076154 type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946,FlyMine:FBpp0076154,modMine:FBpp0076154; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0309532 type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0309532; name=RpS9-PE; parent=FBgn0010408,FBtr0342577; dbxref=GB_protein:AHN58033,REFSEQ:NP_001287008,FlyBase:FBpp0309532,FlyBase_Annotation_IDs:CG3395-PE; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076152; name=RpS9-PA; parent=FBgn0010408,FBtr0076423; dbxref=FlyBase:FBpp0076152,FlyBase_Annotation_IDs:CG3395-PA,GB_protein:AAF50249.1,REFSEQ:NP_524004,GB_protein:AAF50249,UniProt/Swiss-Prot:P55935; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0076154; name=RpS9-PD; parent=FBgn0010408,FBtr0076425; dbxref=FlyBase:FBpp0076154,FlyBase_Annotation_IDs:CG3395-PD,GB_protein:AAN11946.1,REFSEQ:NP_729506,GB_protein:AAN11946,UniProt/Swiss-Prot:P55935,FlyMine:FBpp0076154,modMine:FBpp0076154; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(9511056..9511278,9510465..9510651,9509981..9510158)); ID=FBpp0309532; name=RpS9-PE; parent=FBgn0010408,FBtr0342577; dbxref=GB_protein:AHN58033,REFSEQ:NP_001287008,FlyBase:FBpp0309532,FlyBase_Annotation_IDs:CG3395-PE,UniProt/Swiss-Prot:P55935; MD5=7752e85d52003f2a9702c19d0b7cfb88; length=195; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 195 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISS][NAS]
    ribosome [NAS]
    Biological Process: mitotic spindle elongation [IMP]
    mitotic spindle organization [IMP]
    translation [ISS][NAS]
    Molecular Function: structural constituent of ribosome [ISS][NAS]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNGRIPSVF SKTYVTPRRP YEKARLDQEL KIIGEYGLRN KREVWRVKYA LAKIRKAARE  60
   61 LLTLDEKDEK RLFQGNALLR RLVRIGVLDE SRMKLDYVLG LKIEDFLERR LQTQVFKLGL 120
  121 AKSIHHARVL IRQRHIRVRK QVVNIPSFVV RLDSQKHIDF SLKSPFGGGR PGRVKRKNLK 180
  181 KNQGGGGGAA EEEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] PSI-BLAST 40.154902 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle