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Protein Overview: CG13670-PA

General Information:
Name(s) found: CG13670-PA / FBpp0076431 [FlyBase]
Description(s) found:
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  • gi|85857740|gb|ABC86405.1| IP09562p [Drosophila melanogaster] [NCBI NR]
  • gi|7295119|gb|AAF50444.1| CG13670 [Drosophila melanogaster] [NCBI NR]
  • gi|24660807|ref|NP_648207.1| CG13670 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13670 (CG13670, FBgn0035873). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:8313863..8315383. It has the cytological map location 66C7. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based larval cuticle. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13670-PA translation from_gene[CG13670 CG13670 FBgn0035873] seq_release:3 mol_weight=29229 cds_boundaries:(3L:8,279,546..8,280,901[+]) aa_length:266 transcript_info:[CG13670-RA seq_release:3] gene_info:[gene symbol:CG13670 FBgn0035873 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VSH5) CG13670 protein [DrosMelano7227.FASTAC.txt]
  • (AE003556) CG13670 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13670-PA [Drosophila melanogaster]gi|24660807|ref|NP_648207.1| CG13670-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(8313936..8314336,8314895..8315294); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444; MD5=2f5 [fly-100309-contam.fasta]
  • CG13670-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP09562p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(8313936..8314336,8314895..8315294); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(8313936..8314336,8314895..8315294); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13670 OS=Drosophila melanogaster GN=CG13670 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(8313936..8314336,8314895..8315294); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444,FlyMine:FBpp0076431,modMine:FBpp0076431; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(8320836..8321236,8321795..8322194); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444,FlyMine:FBpp0076431,modMine:FBpp0076431; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(8320836..8321236,8321795..8322194); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444,FlyMine:FBpp0076431,modMine:FBpp0076431; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • IP09562p OS=Drosophila melanogaster GN=CG13670 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0076431 type=protein; loc=3L:join(8320836..8321236,8321795..8322194); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444,FlyMine:FBpp0076431,modMine:FBpp0076431; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(8320836..8321236,8321795..8322194); ID=FBpp0076431; name=CG13670-PA; parent=FBgn0035873,FBtr0076708; dbxref=FlyBase:FBpp0076431,FlyBase_Annotation_IDs:CG13670-PA,GB_protein:AAF50444.1,REFSEQ:NP_648207,GB_protein:AAF50444,UniProt/TrEMBL:Q9VSH5,FlyMine:FBpp0076431,modMine:FBpp0076431; MD5=2f5e8568f66542b585f3a68eb87a8023; length=266; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of chitin-based larval cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRRITSTA GDANGPGVGP KARTSTRWRF RIALRREARF GQAVRQLKDL LPLLALIAGC  60
   61 GMIGACAAVG YSYARFEGPV VGPEHLVTVH DGRTVDYVAR PEYSFAYGVE DGKTRVLQNR 120
  121 KETRNGDEVR GVYSVVDPDG TLRVVKYTAD DANGFQAEVI TNGVKTLHGH GSDGDAGGGS 180
  181 VDSQVRHHSA EAHKAKEDDE EEDEREREHQ GNGQYQVHED YDEGKDEQAE EDEEGGGHQE 240
  241 YEGSSEEGYV EADAHSQQEE SSDEDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..167] Pfam 27.60206 No description for PF00379.14 was found. Confident ab initio structure predictions are available.
    3 View Details [168..266] MSA 12.165996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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