YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG13670-PA
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRRITSTA GDANGPGVGP KARTSTRWRF RIALRREARF GQAVRQLKDL LPLLALIAGC  60
   61 GMIGACAAVG YSYARFEGPV VGPEHLVTVH DGRTVDYVAR PEYSFAYGVE DGKTRVLQNR 120
  121 KETRNGDEVR GVYSVVDPDG TLRVVKYTAD DANGFQAEVI TNGVKTLHGH GSDGDAGGGS 180
  181 VDSQVRHHSA EAHKAKEDDE EEDEREREHQ GNGQYQVHED YDEGKDEQAE EDEEGGGHQE 240
  241 YEGSSEEGYV EADAHSQQEE SSDEDY

Type	Start	End	Confidence
Cytoplasmic	1	49	0.68
Transmembrane Helix	50	71	0.67
Non-Cytoplasmic	72	266	0.96