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Protein Overview: Srp19-PA

General Information:
Name(s) found: Srp19-PA / FBpp0076589 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Signal recognition particle protein 19 is referred to in FlyBase by the symbol Dmel\Srp19 (CG4457, FBgn0015298). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:7340410..7341125. It has the cytological map location 65F5. Based on sequence similarity, it is predicted to have molecular function</span>: 7S RNA binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: SRP-dependent cotranslational protein targeting to membrane. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: signal recognition particle, endoplasmic reticulum targeting [ISS]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [ISS]
    Molecular Function: 7S RNA binding [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVPMKKN WSPSMKHNDM ERWICIYPAY INRKKTRQEG RRLPKENCVD NPSYIEIRDV  60
   61 LSVSNLQFLM ENKKYCRENS SEMEFRGRVR VQLRNVDGTL YNNDFPTRES IMLHIASKIP 120
  121 QLKTRQNKSG DSYHQQSQPQ SNASGSGGGG GGKKGKGKRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 42.221849 SRP19

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 7S RNA binding
    		•  9.78481287368136 bayes_pls_golite062009
  • binding
    		•  1.52106126273009 bayes_pls_golite062009
  • RNA binding
    		•  0.871295298918697 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle