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Protein Overview: FBpp0305562, FBp...

General Information:
Name(s) found: FBpp0311286 [FlyBase]
FBpp0305562 [FlyBase]
RpL18-PA / FBpp0076602 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • type=protein; loc=3L:complement(7233401..7233877,7233955..7234041,7234326..7234328); ID=FBpp0311286; name=RpL18-PC; parent=FBgn0035753,FBtr0345036; dbxref=FlyBase:FBpp0311286,FlyBase_Annotation_IDs:CG8615-PC; MD5=7321237c81d349ed4322de58426e4c66; length=188; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3L:complement(7233401..7233877,7233955..7234041,7234326..7234328); ID=FBpp0305562; name=RpL18-PB; parent=FBgn0035753,FBtr0333370; dbxref=REFSEQ:NP_001261501,GB_protein:AGB94196,FlyBase:FBpp0305562,FlyBase_Annotation_IDs:CG8615-PB; MD5=7321237c81d349ed4322de58426e4c66; length=188; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein L18 is referred to in FlyBase by the symbol Dmel\RpL18 (CG8615, FBgn0035753). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:7233294..7234449. It has the cytological map location 65E9. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 188 amino acids

    Gene Ontology:
    Cellular Component: cytosolic large ribosomal subunit [ISS]
    Biological Process: mitotic spindle elongation [IMP]
    mitotic spindle organization [IMP]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIDINHKYD RKVRRTEPKS QDVYLRLLVK LYRFLQRRTN KKFNRIILKR LFMSKINRPP  60
   61 LSLQRIARFF KAANQPESTI VVVGTVTDDA RLLVVPKLTV CALHVTQTAR ERILKAGGEV 120
  121 LTFDQLALRS PTGKNTLLLQ GRRTARTACK HFGKAPGVPH SHTRPYVRSK GRKFERARGR 180
  181 RSSCGYKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 39.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
    2 View Details [143..188] MSA 1.05798 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle