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Protein Overview: vvl-PA, FBpp0311831

General Information:
Name(s) found: FBpp0311831 [FlyBase]
vvl-PA / FBpp0076653 [FlyBase]
Description(s) found:
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  • gi|27735164|sp|P16241.5|CF1A_DROME RecName: Full=POU domain protein CF1A; AltName: Full=Chorion factor 1A; Short=CF1-A; AltName: Full=Ventral veins lacking protein; Short=Drifter protein [NCBI NR]
  • gi|23094063|gb|AAF50641.3| ventral veins lacking [Drosophila melanogaster] [NCBI NR]
  • gi|17737539|ref|NP_523948.1| ventral veins lacking [Drosophila melanogaster] [NCBI NR]
  • gi|158154|gb|AAA28831.1| POU domain protein [NCBI NR]
  • gi|157816296|gb|ABV82142.1| FI01008p [Drosophila melanogaster] [NCBI NR]
  • POU domain protein CF1A OS=Drosophila melanogaster GN=vvl PE=2 SV=5 [Swiss-Prot]
  • type=protein; loc=3L:6783926..6785209; ID=FBpp0311831; name=vvl-PD; parent=FBgn0086680,FBtr0345911; dbxref=FlyBase:FBpp0311831,FlyBase_Annotation_IDs:CG10037-PD; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r5.56; species=Dmel; [FlyBase]
  • The gene ventral veins lacking is referred to in FlyBase by the symbol Dmel\vvl (CG10037, FBgn0086680). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:6783252..6787637. It has the cytological map location 65C5. Based on sequence similarity, it is predicted to have molecular function</span>: RNA polymerase II transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: motor axon guidance; brain development; brain segmentation; peripheral nervous system development. 28 alleles are reported. The phenotypes of these alleles are annotated with 36 unique terms, many of which group under: peripheral nervous system; nervous system; organ system; embryonic nervous system; adult segment; adult mesothoracic segment; multi-cell-component structure; commissure; abdominal lateral pentascolopidial chordotonal organ lch5; embryonic glial cell; larval abdominal segment 5; primordium; spiracle. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG10037-PA translation from_gene[CG10037 vvl FBgn0003995] seq_release:3 mol_weight=45928 cds_boundaries:(3L:6,750,355..6,751,635[+]) aa_length:427 transcript_info:[CG10037-RA seq_release:3] gene_info:[gene symbol:vvl FBgn0003995 gene_boundaries:(3L:6, [hmr_yeast5_DM3-1_pombe.fasta]
  • (P16241) POU-domain protein CF1A (Chorion factor 1A) (CF1-A) (Ventral veins lacking protein) (Drifter protein) [DrosMelano7227.FASTAC.txt]
  • CG10037-PA [Drosophila melanogaster]gi|17737539|ref|NP_523948.1| CG10037-PA [Drosophila melanogaster]gi|27735164|sp|P16241|CF1A_DROME POU-domain protein CF1A (Chorion factor 1A) (CF1-A) (Ventral veins lacking protein) (Drifter protein)gi|158154|gb|AAA2 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:6783926..6785209; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641; MD5=b37a9a267d344b2ae17f2c7902c0fe [fly-100309-contam.fasta]
  • POU-domain protein CF1A (Chorion factor 1A) (CF1-A) (Ventral veins lacking protein) (Drifter protein) [nr-271106-contam.fasta]
  • CG10037-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • POU domain protein [nr-271106-contam.fasta]
  • ventral veins lacking CG10037-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:6783926..6785209; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:6783926..6785209; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • FI01008p OS=Drosophila melanogaster GN=vvl PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:6783926..6785209; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641,FlyMine:FBpp0076653,modMine:FBpp0076653; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:6790826..6792109; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641,FlyMine:FBpp0076653,modMine:FBpp0076653; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:6790826..6792109; ID=FBpp0311831; name=vvl-PD; parent=FBgn0086680,FBtr0345911; dbxref=FlyBase:FBpp0311831,FlyBase_Annotation_IDs:CG10037-PD,GB_protein:AHN57982,REFSEQ:NP_001286957; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:6790826..6792109; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641,FlyMine:FBpp0076653,modMine:FBpp0076653; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:6790826..6792109; ID=FBpp0311831; name=vvl-PD; parent=FBgn0086680,FBtr0345911; dbxref=FlyBase:FBpp0311831,FlyBase_Annotation_IDs:CG10037-PD,GB_protein:AHN57982,REFSEQ:NP_001286957; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P16241, POU domain protein OS=Drosophila melanogaster GN=vvl PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0076653 type=protein; loc=3L:6790826..6792109; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641,FlyMine:FBpp0076653,modMine:FBpp0076653; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311831 type=protein; loc=3L:6790826..6792109; ID=FBpp0311831; name=vvl-PD; parent=FBgn0086680,FBtr0345911; dbxref=FlyBase:FBpp0311831,FlyBase_Annotation_IDs:CG10037-PD,GB_protein:AHN57982,REFSEQ:NP_001286957; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:6790826..6792109; ID=FBpp0076653; name=vvl-PA; parent=FBgn0086680,FBtr0076944; dbxref=GB_protein:AAF50641.3,FlyBase:FBpp0076653,FlyBase_Annotation_IDs:CG10037-PA,REFSEQ:NP_523948,GB_protein:AAF50641,UniProt/Swiss-Prot:P16241,FlyMine:FBpp0076653,modMine:FBpp0076653; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:6790826..6792109; ID=FBpp0311831; name=vvl-PD; parent=FBgn0086680,FBtr0345911; dbxref=FlyBase:FBpp0311831,FlyBase_Annotation_IDs:CG10037-PD,GB_protein:AHN57982,REFSEQ:NP_001286957,UniProt/Swiss-Prot:P16241; MD5=b37a9a267d344b2ae17f2c7902c0fed0; length=427; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS][NAS]
    Biological Process: motor axon guidance [IMP]
    brain segmentation [IMP]
    peripheral nervous system development [IMP][TAS]
    regulation of transcription, DNA-dependent [IEA][NAS]
    brain development [IMP]
    epithelial cell fate determination, open tracheal system [TAS]
    regulation of transcription [IEA]
    dendrite morphogenesis [TAS]
    Molecular Function: DNA binding [NAS]
    transcription factor activity [IEA][TAS]
    protein binding [TAS]
    RNA polymerase II transcription factor activity [ISS]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATSYMTPP SGDLDMALGG GGYHTSSPRS AADAGEMKYM QHHHHHHAAA AAAAHHQLPS  60
   61 SPSPNGQGNG GGLGLGSGSG LGSWSALHPD PWMQTHHTHH LPAAAAVASA ADTVKQEMSH 120
  121 LSQQTRIQQG MASPHAAWHA PHAGHYAPTG GSPLQYHHAM NGMLHHPAHA VAAAHHQSVA 180
  181 PLHHTLRGES PQLHIHHHMG GGDRDAISGG EEDTPTSDDL EAFAKQFKQR RIKLGFTQAD 240
  241 VGLALGTLYG NVFSQTTICR FEALQLSFKN MCKLKPLLQK WLEEADSTTG SPTSIDKIAA 300
  301 QGRKRKKRTS IEVSVKGALE QHFHKQPKPS AQEITSLADS LQLEKEVVRV WFCNRRQKEK 360
  361 RMTPPNTLGG DMMDGMPPGH MHHGGYHPHH DMHGSPMGTH SHSHSPPMLS PQNMQSSAVA 420
  421 AHQLAAH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle