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Protein Overview: Lcp65Ab2-PA, Lcp...

General Information:
Name(s) found: Lcp65Ab1-PA / FBpp0076702 [FlyBase]
Lcp65Ab2-PA / FBpp0076701 [FlyBase]
Description(s) found:
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  • gi|41019142|sp|P92192.1|LCP5_DROME RecName: Full=Larval cuticle protein 5; AltName: Full=Larval cuticle protein V; Flags: Precursor [NCBI NR]
  • gi|28574354|ref|NP_788469.1| Lcp65Ab2 [Drosophila melanogaster] [NCBI NR]
  • gi|24659163|ref|NP_524814.2| Lcp65Ab1 [Drosophila melanogaster] [NCBI NR]
  • gi|1857597|gb|AAB88066.1| cuticle protein LCP65Ab1 [Drosophila melanogaster] [NCBI NR]
  • gi|1857595|gb|AAB88065.1| cuticle protein LCP65Ab2 [Drosophila melanogaster] [NCBI NR]
  • gi|17945884|gb|AAL48988.1| RE39879p [Drosophila melanogaster] [NCBI NR]
  • gi|10728111|gb|AAG22331.1| Lcp65Ab1 [Drosophila melanogaster] [NCBI NR]
  • gi|10728108|gb|AAG22328.1| Lcp65Ab2 [Drosophila melanogaster] [NCBI NR]
  • Larval cuticle protein 5 OS=Drosophila melanogaster GN=Lcp65Ab1 PE=1 SV=1 [Swiss-Prot]
  • The gene Lcp65Ab1 is referred to in FlyBase by the symbol Dmel\Lcp65Ab1 (CG32400, FBgn0020644). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:6142648..6143060. It has the cytological map location 65A6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle; structural constituent of chitin-based larval cuticle. It is reported to be involved in the biological process</span>: larval chitin-based cuticle development. 8 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • The gene Lcp65Ab2 is referred to in FlyBase by the symbol Dmel\Lcp65Ab2 (CG18773, FBgn0020643). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:6139771..6140189. It has the cytological map location 65A6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle; structural constituent of chitin-based larval cuticle. The biological processes in which it is involved are not known. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG18773-PA translation from_gene[CG18773 Lcp65Ab2 FBgn0020643] seq_release:3 mol_weight=11267 cds_boundaries:(3L:6,106,030..6,106,341[+]) aa_length:104 transcript_info:[CG18773-RA seq_release:3] gene_info:[gene symbol:Lcp65Ab2 FBgn0020643 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG32400-PA translation from_gene[CG32400 Lcp65Ab1 FBgn0020644] seq_release:3 mol_weight=11267 cds_boundaries:(3L:6,109,122..6,109,433[+]) aa_length:104 transcript_info:[CG32400-RA seq_release:3] gene_info:[gene symbol:Lcp65Ab1 synonyms:[CG18776] FBgn0 [hmr_yeast5_DM3-1_pombe.fasta]
  • (P92192) Larval cuticle protein V precursor [DrosMelano7227.FASTAC.txt]
  • (AE003563) CG18776 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • (AE003563) CG18773 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG32400-PA [Drosophila melanogaster]gi|10728108|gb|AAG22328.1| CG18773-PA [Drosophila melanogaster]gi|17945884|gb|AAL48988.1| RE39879p [Drosophila melanogaster]gi|28574354|ref|NP_788469.1| CG18773-PA [Drosophila melanogaster]gi|24659163|ref|NP_524814. [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:6139822..6140136; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328; MD5=c113e98321a0da768125ba94f [fly-100309-contam.fasta]
  • type=protein; loc=3L:6142693..6143007; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f [fly-100309-contam.fasta]
  • Larval cuticle protein 5 precursor (Larval cuticle protein V) [nr-271106-contam.fasta]
  • CG32400-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG18773-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE39879p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Lcp65Ab2 CG18773-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Lcp65Ab1 CG32400-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • cuticle protein LCP65Ab1 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • cuticle protein LCP65Ab2 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:6139822..6140136; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:6142693..6143007; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:6139822..6140136; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:6142693..6143007; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • RT02904p OS=Drosophila melanogaster GN=Lcp65Ab2-RA PE=4 SV=3 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:6142693..6143007; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:6139822..6140136; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328,FlyMine:FBpp0076701,modMine:FBpp0076701; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:6146722..6147036; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328,FlyMine:FBpp0076701,modMine:FBpp0076701; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:6149593..6149907; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:6146722..6147036; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328,FlyMine:FBpp0076701,modMine:FBpp0076701; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:6149593..6149907; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0076701 type=protein; loc=3L:6146722..6147036; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328,FlyMine:FBpp0076701,modMine:FBpp0076701; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0076702 type=protein; loc=3L:6149593..6149907; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:6146722..6147036; ID=FBpp0076701; name=Lcp65Ab2-PA; parent=FBgn0020643,FBtr0076992; dbxref=FlyBase:FBpp0076701,FlyBase_Annotation_IDs:CG18773-PA,GB_protein:AAG22328.1,REFSEQ:NP_788469,GB_protein:AAG22328,UniProt/Swiss-Prot:P92192,FlyMine:FBpp0076701,modMine:FBpp0076701; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:6149593..6149907; ID=FBpp0076702; name=Lcp65Ab1-PA; parent=FBgn0020644,FBtr0076994; dbxref=FlyBase:FBpp0076702,FlyBase_Annotation_IDs:CG32400-PA,GB_protein:AAG22331.1,REFSEQ:NP_524814,GB_protein:AAG22331,UniProt/Swiss-Prot:P92192; MD5=c113e98321a0da768125ba94f24ea15c; length=104; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 104 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [NAS]
    Biological Process: larval chitin-based cuticle development [NAS]
    Molecular Function: structural constituent of chitin-based larval cuticle [ISS][NAS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLIVFVAL FAMAVARPNL AEIVRQVSDV EPEKWSSDVE TSDGTSIKQE GVLKNAGTDN  60
   61 EAAVVHGSFT WVDEKTGEKF TITYVADENG YQPQGAHLPV APVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] Pfam 20.677781 No description for PF00379.14 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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