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View Structure Prediction Details

Protein: Lcp65Ab2-PA, Lcp...
Organism: Drosophila melanogaster
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lcp65Ab2-PA, Lcp....

Description E-value Query
Range
Subject
Range
gi|1857614, gi|1... - gi|1857616|gb|AAB48464.1| putative cuticle protein LCP6 [Drosophila melanogaster], gi|1857614|gb|AAB...
139.0 [0..1] [103..1]
AGAP009875-PA - CPR77: cuticular protein RR-1 family (CPR77)|protein_coding|3R:44651286:44651883:-1|gene:AGAP009875
gi|158298840, gi... - gi|58391952|ref|XP_318995.2| ENSANGP00000014836 [Anopheles gambiae str. PEST], gi|55236096|gb|EAA144...
130.0 [0..2] [103..3]
gi|91083447 - gi|91083447|ref|XP_970381.1| PREDICTED: similar to cuticle protein 1 [Tribolium castaneum]
129.0 [0..1] [102..1]
gi|108881215, gi... - gi|157135292|ref|XP_001656586.1| pupal cuticle protein 78E, putative [Aedes aegypti], gi|108881215|g...
124.0 [0..1] [98..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLIVFVAL FAMAVARPNL AEIVRQVSDV EPEKWSSDVE TSDGTSIKQE GVLKNAGTDN  60
   61 EAAVVHGSFT WVDEKTGEKF TITYVADENG YQPQGAHLPV APVA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 20.677781
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.909 N/A N/A d.17.2 Copper amine oxidase, domains 1 and 2


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle