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Protein Overview: CG5568-PA

General Information:
Name(s) found: CG5568-PA / FBpp0076733 [FlyBase]
Description(s) found:
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  • gi|23095591|gb|AAF50738.3| CG5568 [Drosophila melanogaster] [NCBI NR]
  • gi|21358303|ref|NP_647992.1| CG5568 [Drosophila melanogaster] [NCBI NR]
  • gi|16198267|gb|AAL13962.1| LD47944p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5568 (CG5568, FBgn0035641). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:5864602..5866618. It has the cytological map location 64F3. Based on sequence similarity, it is predicted to have molecular function</span>: 4-coumarate-CoA ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5568-PA translation from_gene[CG5568 CG5568 FBgn0035641] seq_release:3 mol_weight=60958 cds_boundaries:(3L:5,830,906..5,832,647[+]) aa_length:545 transcript_info:[CG5568-RA seq_release:3] gene_info:[gene symbol:CG5568 FBgn0035641 gene_boundaries:(3L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VRQ4) CG5568 protein (LD47944p) [DrosMelano7227.FASTAC.txt]
  • CG5568-PA [Drosophila melanogaster]gi|16198267|gb|AAL13962.1| LD47944p [Drosophila melanogaster]gi|21358303|ref|NP_647992.1| CG5568-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(5864698..5864865,5864922..5865433,5865485..5866442); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AA [fly-100309-contam.fasta]
  • LD47944p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5568-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(5864698..5864865,5864922..5865433,5865485..5866442); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(5864698..5864865,5864922..5865433,5865485..5866442); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5568 OS=Drosophila melanogaster GN=CG5568 PE=2 SV=3 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(5864698..5864865,5864922..5865433,5865485..5866442); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738,FlyMine:FBpp0076733,modMine:FBpp0076733; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(5871598..5871765,5871822..5872333,5872385..5873342); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738,FlyMine:FBpp0076733,modMine:FBpp0076733; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(5871598..5871765,5871822..5872333,5872385..5873342); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738,FlyMine:FBpp0076733,modMine:FBpp0076733; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0076733 type=protein; loc=3L:join(5871598..5871765,5871822..5872333,5872385..5873342); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738,FlyMine:FBpp0076733,modMine:FBpp0076733; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(5871598..5871765,5871822..5872333,5872385..5873342); ID=FBpp0076733; name=CG5568-PA; parent=FBgn0035641,FBtr0077025; dbxref=FlyBase:FBpp0076733,FlyBase_Annotation_IDs:CG5568-PA,GB_protein:AAF50738.3,REFSEQ:NP_647992,GB_protein:AAF50738,UniProt/TrEMBL:Q9VRQ4,FlyMine:FBpp0076733,modMine:FBpp0076733; MD5=c09ef4ad10b99bd7b2db1b7c3ac45dcd; length=545; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: 4-coumarate-CoA ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELQAGKSP FKTRNTFDEN LKIWSGGEKR SLFSPDLSIG EIIFQQMERN AMLTAQISVT  60
   61 ENTELTWKDI QTNAMKVASY MRKLGLEQGD FVGVIGRLTT HLTALAYACF FNGTPYHALH 120
  121 TEYEQSAIER LFGITKPRLI FCDGDEFEKV QAATKGLQVQ IVTMRNHPAG ILRIQDILTT 180
  181 PVEMNFRPVR LKDGTDQLLA ILSSSGTSGL PKAVTISNSH QIIGSFLPVD SSIIQYNPNT 240
  241 LDWASGITMT INAAVFSLTS IIEDCDFDPA NLCGLIEKYR ISMVFVSSSQ LAMLSNCPEF 300
  301 YAADLSSVKY FFYGGSNCSL EVQNKIRSRL SNECVNFSYT LTELNSPGCL NFNFDEKPNS 360
  361 VGRPVRGIQI KIVNELGEAQ GPNVVGEICF NNGQKWPGYY KNPEETKKMQ DSENWFHTGD 420
  421 LGYMDEDGYL FIIDRLKDML KYQTIMYYPS EIESVIAEMP NVVEACVFGI WDPVYGDKAA 480
  481 ASVVKKQGTQ LEAQDVVEYV RKRIPAKFKQ LNGGALIVDH IIQSGNRKAN RAATKAEFLR 540
  541 IMEKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle