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Protein Overview: FBpp0305589, CG7...

General Information:
Name(s) found: FBpp0305589 [FlyBase]
CG7864-PA / FBpp0072626 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=3L:join(1558832..1559104,1559159..1559785); ID=FBpp0305589; name=Pex10-PB; parent=FBgn0035233,FBtr0333397; dbxref=REFSEQ:NP_001261265,GB_protein:AGB93960,FlyBase:FBpp0305589,FlyBase_Annotation_IDs:CG7864-PB; MD5=d9d2565678b519167e534ad53a378918; length=299; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG7864 (CG7864, FBgn0035233). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:1558235..1559863. It has the cytological map location 62A5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: peroxisome organization. 7 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: peroxisomal membrane [IEA]
    Biological Process: peroxisome organization [ISS]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFRNARARQ PEIVRSVQKD ARYTNELAED LSDVLRLTGP RNWIKYNQMC RLLAELSYHG  60
   61 FASANNLQTL GEEYTGIIQV DGNYKQIPSR LLQLIAIVLE FGGDSLFQRL MQKLDTYVAN 120
  121 NDEIRTEIKP QLKKIIQRLR QSPSYVKALH KSLFYLDASK YQLSKRTTGI NYVLIRHWLQ 180
  181 PEFSLYGYKI LGVITFLQVS VSLAISGWDA WREHKRQQLE SIKQAGKNFL QRSSSTKDVD 240
  241 PNTPQCILCL EPRSDSSLTP CGHIFCWSCL LEWLEERDEC PLCRESLKKS QVILLQNYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 11.0 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.55003340159545 bayes_pls_golite062009
  • protein binding
    		•  2.35325421236395 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  2.20438586677555 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  1.97264874084155 bayes_pls_golite062009
  • signal transducer activity
    		•  1.5438780730211 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.5438780730211 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.26357595913158 bayes_pls_golite062009
  • transporter activity
    		•  1.15928534291452 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.945691505472547 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.75057755360417 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.693724160233023 bayes_pls_golite062009
  • molecular adaptor activity
    		•  0.68555837423221 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.45412801027969 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.293268642733772 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.246383459363256 bayes_pls_golite062009
  • protein binding, bridging
    		•  0.230308623372106 bayes_pls_golite062009
  • kinase activity
    		•  0.193243470329802 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.193201281459889 bayes_pls_golite062009
  • protein kinase activity
    		•  0.0865488336042732 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0305250212662123 bayes_pls_golite062009
  • receptor binding
    		•  0.00920732436841987 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.33

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle