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Protein Overview: CG3394-PB

General Information:
Name(s) found: CG3394-PB / FBpp0072176 [FlyBase]
Description(s) found:
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  • gi|21626737|gb|AAM68309.1| CG3394, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|20130353|ref|NP_611906.1| CG3394, isoform B [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3394 (CG3394, FBgn0034999). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20181621..20185646. It has the cytological map location 60C6. Based on sequence similarity, it is predicted to have molecular function</span>: long-chain fatty acid transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG3394-PB translation from_gene[CG3394 CG3394 FBgn0034999] seq_release:3 mol_weight=73600 cds_boundaries:(2R:19,339,218..19,341,556[+]) aa_length:661 transcript_info:[CG3394-RB seq_release:3] gene_info:[gene symbol:CG3394 FBgn0034999 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W185) CG3394 protein [DrosMelano7227.FASTAC.txt]
  • (AE003463) CG3394 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3394-PB, isoform B [Drosophila melanogaster]gi|20130353|ref|NP_611906.1| CG3394-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(20183173..20183372,20183431..20184907,20185206..20185514); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_prot [fly-100309-contam.fasta]
  • CG3394-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(20183173..20183372,20183431..20184907,20185206..20185514); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(20183173..20183372,20183431..20184907,20185206..20185514); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG3394, isoform B OS=Drosophila melanogaster GN=CG3394 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(20183173..20183372,20183431..20184907,20185206..20185514); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309,FlyMine:FBpp0072176,modMine:FBpp0072176; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(24295650..24295849,24295908..24297384,24297683..24297991); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309,FlyMine:FBpp0072176,modMine:FBpp0072176; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(24295650..24295849,24295908..24297384,24297683..24297991); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309,FlyMine:FBpp0072176,modMine:FBpp0072176; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8SXR7, CG3394, isoform B OS=Drosophila melanogaster GN=CG3394 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0072176 type=protein; loc=2R:join(24295650..24295849,24295908..24297384,24297683..24297991); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309,FlyMine:FBpp0072176,modMine:FBpp0072176; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(24295650..24295849,24295908..24297384,24297683..24297991); ID=FBpp0072176; name=CG3394-PB; parent=FBgn0034999,FBtr0072269; dbxref=FlyBase:FBpp0072176,FlyBase_Annotation_IDs:CG3394-PB,GB_protein:AAM68309.1,REFSEQ:NP_611906,GB_protein:AAM68309,UniProt/TrEMBL:Q9W185,FlyMine:FBpp0072176,modMine:FBpp0072176; MD5=485034e616fd4bff4ce76bdf370725c0; length=661; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    long-chain fatty acid transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEILLELNLK QKLATRLGTI LLATVIFGAF CWDNALASLT LGAVVALLLR NPTFVFALVM  60
   61 TASRDLKAFQ RFVALNIYLL RKDRGGFTVA RCFQDQARRR PKKTCFVMDD RHLSFAEALE 120
  121 FSQKIAGYFS DRGLERGDCV ALLMETRLEY PCIWLGLSQL GVITALINSN LRGESLLHSI 180
  181 KVANAKALIV GSELLDVLVS LREKEQLDEV PIYQYTDDEV RGVAGHDLLP GAVDLVTALK 240
  241 TQKKLELPSA VCPGEARSKL LYVYTSGTTG LPKAAVITNL RFLFMSAGSY YMLKMSSDDV 300
  301 VYDPLPLYHT AGGIVGVGNA ILNGSTVVLR KKFSARNFWL DCDRHNCTVA QYIGELCRYL 360
  361 LATSYSPDQQ KHNLRLMYGN GLRPQIWSQF VRRFGIPHIG EIYGATEGNS NLINITNRVG 420
  421 AIGFVPVYGS SLYPVQVLRC DEYTGELLKD SKGHCIRCQP GQAGLLVGKV DARRAVSAFH 480
  481 GYADKGASEQ KLLRNVFTSG DVFFNSGDMV VRDILGYFYF KDRTGDTFRW RGENVATQEV 540
  541 EAIITNCVGL EDCVVYGVQI PHVEGKAGMA AIVDPERKVD MDYLSVVLRG SLPPYARPLF 600
  601 IRLLDEIPRT ATFKLKKREL AKEAYDIGQL SDPIYYLNRD GIYRPLSQEQ HELLRSGKAG 660
  661 L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..661] PSI-BLAST 159.0 No description for 2p2bA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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