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Protein Overview: CG13575-PA

General Information:
Name(s) found: CG13575-PA / FBpp0072171 [FlyBase]
Description(s) found:
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  • gi|24762596|ref|NP_611903.1| CG13575 [Drosophila melanogaster] [NCBI NR]
  • gi|23240149|gb|AAF47188.3| CG13575 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13575 (CG13575, FBgn0034996). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20142168..20144937. It has the cytological map location 60C4. Based on sequence similarity, it is predicted to have molecular function</span>: neuropeptide receptor activity; peptide receptor activity, G-protein coupled. Based on sequence similarity, it is predicted to be involved in the biological process</span>: G-protein coupled receptor protein signaling pathway. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13575-PA translation from_gene[CG13575 CG13575 FBgn0034996] seq_release:3 mol_weight=58478 cds_boundaries:(2R:19,298,957..19,300,725[+]) aa_length:521 transcript_info:[CG13575-RA seq_release:3] gene_info:[gene symbol:CG13575 FLAGGED_PROBLEMATIC FBgn [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W189) CG13575 protein [DrosMelano7227.FASTAC.txt]
  • (AE003463) CG13575 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13575-PA [Drosophila melanogaster]gi|24762596|ref|NP_611903.1| CG13575-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(20142912..20143265,20143321..20143668,20143820..20144683); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_pr [fly-100309-contam.fasta]
  • CG13575-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(20142912..20143265,20143321..20143668,20143820..20144683); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(20142912..20143265,20143321..20143668,20143820..20144683); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13575 OS=Drosophila melanogaster GN=CG13575 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(20142912..20143265,20143321..20143668,20143820..20144683); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188,FlyMine:FBpp0072171,modMine:FBpp0072171; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(24255389..24255742,24255798..24256145,24256297..24257160); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188,FlyMine:FBpp0072171,modMine:FBpp0072171; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(24255389..24255742,24255798..24256145,24256297..24257160); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188,FlyMine:FBpp0072171,modMine:FBpp0072171; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG13575 OS=Drosophila melanogaster GN=CG13575-RA PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0072171 type=protein; loc=2R:join(24255389..24255742,24255798..24256145,24256297..24257160); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188,FlyMine:FBpp0072171,modMine:FBpp0072171; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(24255389..24255742,24255798..24256145,24256297..24257160); ID=FBpp0072171; name=CG13575-PA; parent=FBgn0034996,FBtr0072264; dbxref=FlyBase:FBpp0072171,FlyBase_Annotation_IDs:CG13575-PA,GB_protein:AAF47188.3,REFSEQ:NP_611903,GB_protein:AAF47188,UniProt/TrEMBL:Q9W189,FlyMine:FBpp0072171,modMine:FBpp0072171; MD5=76fe77a12a5d47115d055c4b417caa16; length=521; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 521 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA][ISS]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEA][ISS]
    Molecular Function: peptide receptor activity, G-protein coupled [ISS]
    neuropeptide receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLHYTFDQ LELYLEWAFA QHGEATPIPS IQPYPGVFVG DLSQLNRFKR HAFSAVVGTL  60
   61 FVLAFCGNLS TLYVNSRRKL RPFFRACLIS LACSDLVSSI FCTVSYMAQF QAQYLQLWTI 120
  121 GGFMCKFVPF ITTTSVLSGS LTLVAIALDR YLAVMRPVLG FWSPDKRFST LSMLLIWACS 180
  181 IGSSGPLLGI YDYRKIYLLD VEDSSEESEE VVTAVPEELV VTELEMVHMC LAGDHDVGLY 240
  241 YVILFTLIFL PCIVSFLWLN AVIARQLWLR RHYHQEQQEQ HQEPKEGQFK TMANGGDLLM 300
  301 PSTLVSAMGV AVPFALDNTP LPPKSTVNAP GKKTTAAALA REARHRKMVV VVLLMMAVFI 360
  361 CLRLPAWVFL IMRLYGSYSE PIDWLLYFSF GILNLFSCAL NPIFYTFLTQ TIRTLTLVKH 420
  421 KIQGFLGCPP GKVPDGMPTD QMDKSGCCCG LRPPTFTWRC HPSRDRAAAT VIRDVDQPDP 480
  481 PSDQVQPDPS SLRRFLSYKQ EVFTIYKQCG DSSSASIESS A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 32.522879 Rhodopsin
    2 View Details [351..521] FFAS03 3.28 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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