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Protein Overview: Chi-PA

General Information:
Name(s) found: Chi-PA / FBpp0072100 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • The gene Chip is referred to in FlyBase by the symbol Dmel\Chi (CG3924, FBgn0013764). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19919062..19921459. It has the cytological map location 60B5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: transcription cofactor activity. There is experimental evidence that it is involved in the biological process</span>: axon guidance; nervous system development; bristle morphogenesis; imaginal disc-derived wing morphogenesis; positive regulation of transcription; transcription; phagocytosis, engulfment. 32 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: adult segment; adult mesothoracic segment; organ system; thoracic segment; appendage segment; metatarsus; integumentary plate; peripheral nervous system; embryonic neuron; postalar bristle. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 577 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: bristle morphogenesis [IMP]
    phagocytosis, engulfment [IMP]
    transcription [IMP]
    blastoderm segmentation [TAS]
    nervous system development [IMP]
    imaginal disc-derived wing morphogenesis [IMP]
    axon guidance [IMP]
    positive regulation of transcription [IMP]
    Molecular Function: transcription cofactor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRGLNAGN TMTSQANIDD GSWKAVSEGG SMLPASNSAV LNPDGSNQSG FAQGGLPYNS  60
   61 AGNPYPPAGQ SSPAGNQSIV FQNSNQPGSN TPQYTSSPAP SGSSTPGPVG AQNIPGNYPQ 120
  121 SATAGNFNGP VGGPFGSPSS GLGQFSRPAS SGTPFNSGQA GHFSSPTVFS VGGQFNPMPP 180
  181 ASPFGHGGNH PMMGGPQQME RIDQGFRRHN SYFSHTEHRV FELNKRLQQR NEESDNCWWD 240
  241 SFTTEFFEDD ARLTILFCLE DGPKRYTIGR TLIPRFFRSI YEGGVSDLYF QLKHAKESFH 300
  301 NTSITLDCDQ CTVITQHGKP FFTKVCADAR LILEFMYDDY MRIKSWHMTI KGHRELIPRS 360
  361 VIGTSLPPDP MLLDQITKNI TRAGITNSTL NYLRLCVILE PMQELMSRHK AYALSPRDCL 420
  421 KTTLFQKWQR MVAPPGKKDP QRPPNKRRKR KGSNSGGGNN SNTPPVTNQK RSPSGPSFSL 480
  481 SSQDVMVVGE PTLMGGEFGE EDERLITRLE NTQYDGTNAV EHDNHTGFGH ADSPISGSNP 540
  541 WSIDRAGAIP ASPGNGAAPQ NNANISDIDK KSPIVSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] PSI-BLAST 23.69897 No description for 1y0fA was found.
    2 View Details [231..477] deduced N/A No confident structure predictions are available.
    3 View Details [478..577] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle