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Protein Overview: CG3860-PA

General Information:
Name(s) found: CG3860-PA / FBpp0072110 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG3860 (CG3860, FBgn0034951). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19879661..19882573. It has the cytological map location 60B1. Based on sequence similarity, it is predicted to have molecular function</span>: oxysterol binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: steroid metabolic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: steroid metabolic process [IEA]
    Molecular Function: oxysterol binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGDYAEHV ERTELPATMI SRKEVSIWAI LKNCIGKDLS KITMPVMLNE PLSFLQRLCE  60
   61 YMEYAQLLTE AAQQEHPADR MKYVAAFAVS ALASNWERLG KPFNPLLGET YELQKGDYRI 120
  121 VCEQVSHHPP VSAFHAESKD FKFHGTISPK IKFWGKSVEV NPKGTVTVEF PKWNESYSWT 180
  181 NVNCCVHNII VGRLWIEQYG KMEITNHATG HVASLTFKSA GSGAKNLHRV EGFVKDASET 240
  241 NLYFLYGKWT EFIKCCSAES YVQFLKQGTR KNDDYDGSPN GTPKKMFSKL NSFKLNSFRS 300
  301 LSIQDSDSYP PMEQEGDIPK SDSAYSLDIP DSTTLWSCKP RPSNCSEYYQ FTHFALQLNA 360
  361 MDSNMKPPLT LCPTDSRLRP DILHLEEGNL DGASKEKTRL EEKQRHTRKQ RKSTNSDDWS 420
  421 PRWFKYATNP HTKIDDWLYS GGYWDRKYDN TDTIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..455] PSI-BLAST 76.0 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.761251456948551 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle