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View Structure Prediction Details

Protein: CG3860-PA
Organism: Drosophila melanogaster
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3860-PA.

Description E-value Query
Range
Subject
Range
gi|54636044, gi|... - gi|54636044|gb|EAL25447.1| GA17735-PA [Drosophila pseudoobscura], gi|125808783|ref|XP_001360872.1| G...
501.0 [0..1] [455..1]

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Predicted Domain #1
Region A:
Residues: [1-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGDYAEHV ERTELPATMI SRKEVSIWAI LKNCIGKDLS KITMPVMLNE PLSFLQRLCE  60
   61 YMEYAQLLTE AAQQEHPADR MKYVAAFAVS ALASNWERLG KPFNPLLGET YELQKGDYRI 120
  121 VCEQVSHHPP VSAFHAESKD FKFHGTISPK IKFWGKSVEV NPKGTVTVEF PKWNESYSWT 180
  181 NVNCCVHNII VGRLWIEQYG KMEITNHATG HVASLTFKSA GSGAKNLHRV EGFVKDASET 240
  241 NLYFLYGKWT EFIKCCSAES YVQFLKQGTR KNDDYDGSPN GTPKKMFSKL NSFKLNSFRS 300
  301 LSIQDSDSYP PMEQEGDIPK SDSAYSLDIP DSTTLWSCKP RPSNCSEYYQ FTHFALQLNA 360
  361 MDSNMKPPLT LCPTDSRLRP DILHLEEGNL DGASKEKTRL EEKQRHTRKQ RKSTNSDDWS 420
  421 PRWFKYATNP HTKIDDWLYS GGYWDRKYDN TDTIF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.0
Match: 1zhtA
Description: Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.761251456948551 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle