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Protein Overview: gi|61678332, gi|...

General Information:
Name(s) found: gi|62484392 [NCBI NR]
gi|61678332 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|62484392|ref|NP_726389.3| alpha-catenin-related CG2987-PB, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|61678332|gb|AAM68283.3| CG2987-PB, isoform B [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 812 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNRLSGITFR SSPQRLLIGL ETQPTANVGS PSPLQNQRFR VRDMDNEQIM STFGNIGHLL  60
   61 NIAVERFITI GEIIAEENID IKGDMYEAAK EARDAGKSIE RLCDISPLSG MELRHHIEPL 120
  121 KDYGAIILAA RSLLSSVTRI LLLVDIIVVK KLLTAKKRAS ESLEKLESVM NFTEFVRAFS 180
  181 VFGTEMIELA YLTGHHRNSF KEERRRAQMF SARQILEKSI AILLTSSKNS LIHSDCVIVK 240
  241 ENRDTVFCQI RRAMDLIHFV VKDSIFDTAK HMPFEKQASN PNYENESIYT TIKRIVNLIK 300
  301 RYKYQMSYYE GSGEGNNNSD AYFSFLDDDL WKSEKNLPSA AGGGRMVNNT NFRKHLSSES 360
  361 LDLREELSLA FEKLFEKAHD FTDSPYISHN HRKNILSYCD NCKLEFDLYL NTIMKDQHEG 420
  421 GGGAGGVGGV GGGQVKGRSD PELGMLSSLE ELCKQLVVSV SSQIEDFNES LKICSKLVKS 480
  481 FHVLATNYDI DNLNQRSSKF HDCCDHIFDI CKLLQHIAPT ERLQVQAKCL AINLRIYGPQ 540
  541 VFIAAKILWK YSNSSAANEN FESFSDMWKW LTNEISMIAK KILVSINTTK GDRDADAEKC 600
  601 ESSSDKLTKS GVPATEDGEM VEYSGLEGKN NGDLNTYQSK WSEDLSDDND ILKRAKNMSA 660
  661 MAFLMYQFTK GNGSLRTTQD LFTQAEYFAE EANRLYKVLR HFSYQVPASD NKKDLLNILD 720
  721 RVPTFVQALQ FTVKDHTVGK AATFVKVDHV IRETKNLMNV INKVVSKCFE CATKYKLNLT 780
  781 GITGGLTSER SNENMAGGMC DSKGTTSSSD IP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..610] PSI-BLAST 60.154902 Crystal structure of human full-length vinculin (residues 1-1066)
    2 View Details [611..812] PSI-BLAST 24.69897 Human vinculin head (1-258) in complex with human vinculin tail (879-1066)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.47862012796505 bayes_pls_golite062009
  • protein binding
    		•  2.02579891050608 bayes_pls_golite062009
  • cell adhesion molecule binding
    		•  1.07751635463993 bayes_pls_golite062009
  • cadherin binding
    		•  0.801778192092067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle