| Protein: | gi|61678332, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 812 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61678332, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
564.0 | [0..26] | [812..1] |
|
Region A: Residues: [1-610] |
1 11 21 31 41 51
| | | | | |
1 PNRLSGITFR SSPQRLLIGL ETQPTANVGS PSPLQNQRFR VRDMDNEQIM STFGNIGHLL 60
61 NIAVERFITI GEIIAEENID IKGDMYEAAK EARDAGKSIE RLCDISPLSG MELRHHIEPL 120
121 KDYGAIILAA RSLLSSVTRI LLLVDIIVVK KLLTAKKRAS ESLEKLESVM NFTEFVRAFS 180
181 VFGTEMIELA YLTGHHRNSF KEERRRAQMF SARQILEKSI AILLTSSKNS LIHSDCVIVK 240
241 ENRDTVFCQI RRAMDLIHFV VKDSIFDTAK HMPFEKQASN PNYENESIYT TIKRIVNLIK 300
301 RYKYQMSYYE GSGEGNNNSD AYFSFLDDDL WKSEKNLPSA AGGGRMVNNT NFRKHLSSES 360
361 LDLREELSLA FEKLFEKAHD FTDSPYISHN HRKNILSYCD NCKLEFDLYL NTIMKDQHEG 420
421 GGGAGGVGGV GGGQVKGRSD PELGMLSSLE ELCKQLVVSV SSQIEDFNES LKICSKLVKS 480
481 FHVLATNYDI DNLNQRSSKF HDCCDHIFDI CKLLQHIAPT ERLQVQAKCL AINLRIYGPQ 540
541 VFIAAKILWK YSNSSAANEN FESFSDMWKW LTNEISMIAK KILVSINTTK GDRDADAEKC 600
601 ESSSDKLTKS
|
| Detection Method: |  |
| Confidence: | 60.154902 |
| Match: | 1tr2A |
| Description: | Crystal structure of human full-length vinculin (residues 1-1066) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [611-812] |
1 11 21 31 41 51
| | | | | |
1 GVPATEDGEM VEYSGLEGKN NGDLNTYQSK WSEDLSDDND ILKRAKNMSA MAFLMYQFTK 60
61 GNGSLRTTQD LFTQAEYFAE EANRLYKVLR HFSYQVPASD NKKDLLNILD RVPTFVQALQ 120
121 FTVKDHTVGK AATFVKVDHV IRETKNLMNV INKVVSKCFE CATKYKLNLT GITGGLTSER 180
181 SNENMAGGMC DSKGTTSSSD IP
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 1rkeB |
| Description: | Human vinculin head (1-258) in complex with human vinculin tail (879-1066) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.47862012796505 | bayes_pls_golite062009 |
| protein binding | 2.02579891050608 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.07751635463993 | bayes_pls_golite062009 |
| cadherin binding | 0.801778192092067 | bayes_pls_golite062009 |
