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Protein Overview: Dcp1-PA, Dcp1-PB

General Information:
Name(s) found: Dcp1-PB / FBpp0290862 [FlyBase]
Dcp1-PA / FBpp0072132 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • The gene Decapping protein 1 is referred to in FlyBase by the symbol Dmel\Dcp1 (CG11183, FBgn0034921). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19776465..19777788. It has the cytological map location 60A8. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: nuclear-transcribed mRNA catabolic process; pole plasm oskar mRNA localization; gene silencing by miRNA. 15 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene Decapping protein 1 is referred to in FlyBase by the symbol Dmel\Dcp1 (CG11183, FBgn0034921). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19776465..19777788. It has the cytological map location 60A8. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: nuclear-transcribed mRNA catabolic process; pole plasm oskar mRNA localization; gene silencing by miRNA. 15 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: P granule [IDA]
    cytoplasmic mRNA processing body [IDA]
    Biological Process: [NOT]nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IMP]
    gene silencing by miRNA [IMP]
    nuclear-transcribed mRNA catabolic process [IMP]
    pole plasm oskar mRNA localization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADESITRMN LAAIKKIDPY AKEIVDSSSH VAFYTFNSSQ NEWEKTDVEG AFFIYHRNAE  60
   61 PFHSIFINNR LNTTSFVEPI TGSLELQSQP PFLLYRNERS RIRGFWFYNS EECDRISGLV 120
  121 NGLLKSKDQG TNGQAQRHVS APQQPKQDSS QPASIFNMLT KAQKDYNAQV SGGQPKTPSA 180
  181 ENVTAGNVLK FFESAKQATA ESLFHRVQPL SVDQLEKQQR AATPGEDLLP PAGRDNHESR 240
  241 LSPFQKMQQL NIQLLSDLKI GKSYATAQSP TVAPSSSALM ANDDAGKCLR RLLAGDKPGP 300
  301 ALMPPTMFDA PNNGNPEPQQ PQQPQQPLLN STQFVQAFTY LIQNDKEFAN KLHKAYLNGC 360
  361 SNLLLDSSST YQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] PSI-BLAST 9.522879 Crystal structure of Dcp1p
    2 View Details [72..131] FFAS03 2.69 Crystal structure of Dcp1p
    3 View Details [132..372] MSA 8.171997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle