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Protein Overview: CG34424-PA, FBpp...

General Information:
Name(s) found: FBpp0309891 [FlyBase]
CG34424-PA / FBpp0111637 [FlyBase]
Description(s) found:
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  • gi|24659317|ref|NP_726312.1| CG11079-PC, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|21626608|gb|AAM68244.1| CG34424 [Drosophila melanogaster] [NCBI NR]
  • gi|161077430|ref|NP_001097432.1| CG34424 [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:join(19247003..19247119,19247193..19247448,19247513..19247745); ID=FBpp0309891; name=CG34424-PB; parent=FBgn0085453,FBtr0343202; dbxref=FlyBase:FBpp0309891,FlyBase_Annotation_IDs:CG34424-PB; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG34424 (CG34424, FBgn0085453). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19246742..19247796. It has the cytological map location 59D8. Based on sequence similarity, it is predicted to have molecular function</span>: 5-formyltetrahydrofolate cyclo-ligase activity. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG11079-PC translation from_gene[CG11079 CG11079 FBgn0034851] seq_release:3 mol_weight=22882 cds_boundaries:(2R:18,403,048..18,403,787[+]) aa_length:201 transcript_info:[CG11079-RC seq_release:3] gene_info:[gene symbol:CG11079 FLAGGED_PROBLEMATIC FBgn [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG11079-PB translation from_gene[CG11079 CG11079 FBgn0034851] seq_release:3 mol_weight=22882 cds_boundaries:(2R:18,403,048..18,403,787[+]) aa_length:201 transcript_info:[CG11079-RB seq_release:3] gene_info:[gene symbol:CG11079 FLAGGED_PROBLEMATIC FBgn [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MLS1) CG11079-PB [DrosMelano7227.FASTAC.txt]
  • CG11079-PC, isoform C [Drosophila melanogaster]gi|24659317|ref|NP_726312.1| CG11079-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(19247003..19247119,19247193..19247448,19247513..19247745); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5 [fly-100309-contam.fasta]
  • CG11079-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(19247003..19247119,19247193..19247448,19247513..19247745); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(19247003..19247119,19247193..19247448,19247513..19247745); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG34424 OS=Drosophila melanogaster GN=CG11079 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(19247003..19247119,19247193..19247448,19247513..19247745); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0309891; name=CG34424-PB; parent=FBgn0085453,FBtr0343202; dbxref=FlyBase:FBpp0309891,FlyBase_Annotation_IDs:CG34424-PB,GB_protein:AHN56560,REFSEQ:NP_001286765; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0309891; name=CG34424-PB; parent=FBgn0085453,FBtr0343202; dbxref=FlyBase:FBpp0309891,FlyBase_Annotation_IDs:CG34424-PB,GB_protein:AHN56560,REFSEQ:NP_001286765; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • 5-formyltetrahydrofolate cyclo-ligase OS=Drosophila melanogaster GN=CG34424 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0309891 type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0309891; name=CG34424-PB; parent=FBgn0085453,FBtr0343202; dbxref=FlyBase:FBpp0309891,FlyBase_Annotation_IDs:CG34424-PB,GB_protein:AHN56560,REFSEQ:NP_001286765; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0111637 type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0309891; name=CG34424-PB; parent=FBgn0085453,FBtr0343202; dbxref=FlyBase:FBpp0309891,FlyBase_Annotation_IDs:CG34424-PB,GB_protein:AHN56560,REFSEQ:NP_001286765,UniProt/TrEMBL:Q8MLS1; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:join(23359480..23359596,23359670..23359925,23359990..23360222); ID=FBpp0111637; name=CG34424-PA; parent=FBgn0085453,FBtr0112725; dbxref=FlyBase:FBpp0111637,FlyBase_Annotation_IDs:CG34424-PA,REFSEQ:NP_001097432,GB_protein:AAM68244,UniProt/TrEMBL:Q8MLS1; MD5=7f014d09afd5bf5a9909553ce80f3551; length=201; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: cytosol [ISS]
    Biological Process: NONE FOUND
    Molecular Function: 5-formyltetrahydrofolate cyclo-ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATIQNTLK VALRKRMKDA LKGIDAEAIA RQSQAVTAKV LQSEIFRQAQ RVSIYLSTAS  60
   61 ELDTTALLSE MFRLEKMVFV PTYEGSRMKM VRLRGMEEYE SLPLTKWNIK QPDFKEARED 120
  121 AMTNGHGIDL FIVPGVAFTR CGARMGHGMG YYDKFLKQHA EKYPHKKISL MALSLNEQIV 180
  181 SNEELPMESH DVRLHSVITE N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 45.09691 X-Ray structure of Northeast Structural Genomics target SR44


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle