YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ord-PA, FBpp0309889

General Information:
Name(s) found: FBpp0309889 [FlyBase]
ord-PA / FBpp0071956 [FlyBase]
Description(s) found:
Found 28 descriptions.
SHOW ALL
  • type=protein; loc=2R:complement(19159557..19159811,19159865..19159942,19160010..19160189,19160250..19160499,19160563..19161188,19161247..19161297); ID=FBpp0309889; name=ord-PB; parent=FBgn0003009,FBtr0343199; dbxref=FlyBase:FBpp0309889,FlyBase_Annotation_IDs:CG3134-PB; MD5=8968d25a309e16c0b61f114b2edc5d31; length=479; release=r5.56; species=Dmel; [FlyBase]
  • The gene orientation disruptor is referred to in FlyBase by the symbol Dmel\ord (CG3134, FBgn0003009). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19158778..19161798. It has the cytological map location 59D4. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: female meiosis sister chromatid cohesion; meiotic sister chromatid cohesion; male meiosis chromosome segregation; male meiosis sister chromatid cohesion; meiosis; chromosome segregation; mitosis; gamete generation; sister chromatid cohesion. 24 alleles are reported. The phenotypes of these alleles are annotated with: oocyte; testis; nuclear chromosome; cell cycle; spermatocyte; meiotic cell cycle. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 479 amino acids

    Gene Ontology:
    Cellular Component: female germ cell nucleus [IDA]
    cohesin complex [IDA]
    male germ cell nucleus [IDA]
    Biological Process: sister chromatid cohesion [IMP]
    male meiosis chromosome segregation [IMP]
    male meiosis sister chromatid cohesion [IDA]
    female meiosis sister chromatid cohesion [IDA]
    meiotic sister chromatid cohesion [IMP]
    chromosome segregation [IMP]
    gamete generation [IMP]
    mitosis [IMP]
    meiosis [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGETTLNKN HVIKFIKLKI NNCLGCDEVE INFSKADNVH IIIYSLVTDM AKDLPAVTPV  60
   61 AQAILLLCSL TYPDSDSLET IPQLKIGKGS VSMSFKVYPV NKEEETEPES ESDLDEGPST 120
  121 SKQALERMVQ RAERKAKEAS TRNVHSKGIY VNVERRFDMY FALDTVSYYI NGGKRQSCPL 180
  181 PEFHAKFFVR PQHSINLLRQ LHEKCSGNWL KVIQSDGDGD AFKKFKDPDS PFETFVKLFE 240
  241 SNPIKPNDMM GKLAKTCLHV NEAVRLTERE FILEVFNQVR HIFEYITAQE YTVWFLVPCL 300
  301 GDKDQLRSKT LEDFDLTKVR TSIRRAGDTS NIWWDHTDHN IKDILLVAFQ LDLATHVNQS 360
  361 VLVISHLETL AEFSTMQYVT AFFMNDFYAK KNTEPKWICH RYLERIIDVA LFLGVIVIIE 420
  421 YPSAFTLLQE GRHLIKCFQK ENADSSRTSQ WEIFEDVVKE NESDLEFLKE AVGKVQQNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] deduced N/A No confident structure predictions are available.
    2 View Details [108..328] deduced N/A No confident structure predictions are available.
    3 View Details [329..479] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle