YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Gmer-PA

General Information:
Name(s) found: Gmer-PA / FBpp0071816 [FlyBase]
Description(s) found:
Found 27 descriptions.
SHOW ALL
  • The gene GDP-4-keto-6-deoxy-D-mannose 3,5-epimerase/4-reductase is referred to in FlyBase by the symbol Dmel\Gmer (CG3495, FBgn0034794). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18775095..18776374. It has the cytological map location 59B4. There is experimental evidence that it has the molecular function</span>: GDP-L-fucose synthase activity. There is experimental evidence that it is involved in the biological process</span>: dsRNA transport; GDP-L-fucose biosynthetic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: GDP-L-fucose biosynthetic process [IDA]
    'de novo' GDP-L-fucose biosynthetic process [ISS]
    dsRNA transport [IMP]
    Molecular Function: coenzyme binding [IEA]
    GDP-4-dehydro-D-rhamnose reductase activity [ISS]
    GDP-L-fucose synthase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLVTGGT GLVGKALEAV IKEQSPEDEQ WFFAGSKDAD LTNLAATQAL FAREKPTHVI  60
   61 HLAAMVGGLF HNMNNNLDFL RNNLLINDNV LQTAHEQGCV KVVSCLSTCI FPDKTSYPID 120
  121 ETMVHNGPPH PSNYGYSYAK RLIDVQNHAY HDKYGRVYTS VIPCNIFGPH DNYNPEVSHV 180
  181 IPGMIYRMHQ LVTEKTDVPE NDKVFTVFGS GMPLRQFVYS RDLAELMIWV LRNYESVEPI 240
  241 ILSADEVQEV TIFEVAQAVA KAFNFNGRLV CDTSKSDGQY KKTASNAKLR SFLPDYAFTD 300
  301 LETAINASVK WYIENYDQAR K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 62.69897 GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.03956654822048 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • protein binding
    		•  0.381642189238843 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle