YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gmer-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLVTGGT GLVGKALEAV IKEQSPEDEQ WFFAGSKDAD LTNLAATQAL FAREKPTHVI  60
   61 HLAAMVGGLF HNMNNNLDFL RNNLLINDNV LQTAHEQGCV KVVSCLSTCI FPDKTSYPID 120
  121 ETMVHNGPPH PSNYGYSYAK RLIDVQNHAY HDKYGRVYTS VIPCNIFGPH DNYNPEVSHV 180
  181 IPGMIYRMHQ LVTEKTDVPE NDKVFTVFGS GMPLRQFVYS RDLAELMIWV LRNYESVEPI 240
  241 ILSADEVQEV TIFEVAQAVA KAFNFNGRLV CDTSKSDGQY KKTASNAKLR SFLPDYAFTD 300
  301 LETAINASVK WYIENYDQAR K

Type	Start	End	Confidence
Signal Peptide	1	19	0.64
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	321	0.99