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Protein Overview: Obp58c-PA

General Information:
Name(s) found: Obp58c-PA / FBpp0071831 [FlyBase]
Description(s) found:
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  • gi|7291466|gb|AAF46892.1| Odorant-binding protein 58c [Drosophila melanogaster] [NCBI NR]
  • gi|24658435|ref|NP_611710.1| Odorant-binding protein 58c [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 58c is referred to in FlyBase by the symbol Dmel\Obp58c (CG13524, FBgn0034769). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18593450..18594165. It has the cytological map location 59A3. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13524-PA translation from_gene[CG13524 Obp58c FBgn0034769] seq_release:3 mol_weight=22713 cds_boundaries:(2R:17,749,498..17,750,210[-]) aa_length:199 transcript_info:[CG13524-RA seq_release:3] gene_info:[gene symbol:Obp58c FBgn0034769 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W208) CG13524 protein [DrosMelano7227.FASTAC.txt]
  • (AE003458) CG13524 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13524-PA [Drosophila melanogaster]gi|24658435|ref|NP_611710.1| CG13524-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(18593450..18593658,18593719..18594067,18594124..18594165); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710, [fly-100309-contam.fasta]
  • Odorant-binding protein 58c CG13524-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13524-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(18593450..18593658,18593719..18594067,18594124..18594165); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(18593450..18593658,18593719..18594067,18594124..18594165); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 58c OS=Drosophila melanogaster GN=Obp58c PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(18593450..18593658,18593719..18594067,18594124..18594165); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892,FlyMine:FBpp0071831,modMine:FBpp0071831; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Odorant-binding protein 58c OS=Drosophila melanogaster GN=Obp58c PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2R:complement(join(22706619..22706660,22706214..22706562,22705945..22706153)); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892,FlyMine:FBpp0071831,modMine:FBpp0071831; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(22706619..22706660,22706214..22706562,22705945..22706153)); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892,FlyMine:FBpp0071831,modMine:FBpp0071831; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0071831 type=protein; loc=2R:complement(join(22706619..22706660,22706214..22706562,22705945..22706153)); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892,FlyMine:FBpp0071831,modMine:FBpp0071831; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(22706619..22706660,22706214..22706562,22705945..22706153)); ID=FBpp0071831; name=Obp58c-PA; parent=FBgn0034769,FBtr0071920; dbxref=FlyBase:FBpp0071831,FlyBase_Annotation_IDs:CG13524-PA,GB_protein:AAF46892.1,REFSEQ:NP_611710,GB_protein:AAF46892,UniProt/TrEMBL:Q9W208,FlyMine:FBpp0071831,modMine:FBpp0071831; MD5=b3877cb2da9b16b49873583d7c6e2429; length=199; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 199 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCTILLSFF SLIWFAGGIK IDCENTEAIN EDHIHYCCKH PDGHNDLIEG CARETNFTLP  60
   61 NQNEEALVDI TADRAIRGTC FGKCVFSKLN LMKDNNLDMD AVRSLFTERF PDDPEYAKEM 120
  121 INAFDHCHGK SEENTSMFLS KPLFKQMSKQ FCDPKSSVVL ACVIRQFFHN CPADRWSKTK 180
  181 ECEDTLAFSK KCQDSLATL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] FFAS03 1.03 Nickel-iron hydrogenase, small subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.395472885869348 bayes_pls_golite062009
  • protein binding
    		•  0.0805028060539605 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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