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Protein Overview: CG4030-PA

General Information:
Name(s) found: CG4030-PA / FBpp0071563 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG4030 (CG4030, FBgn0034585). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:16975888..16978507. It has the cytological map location 57B19. Based on sequence similarity, it is predicted to have molecular function</span>: Rab GTPase binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 647 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    Rab GTPase binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEENETRSEA REPTDLPNGE DDATSQHKLS HLQNEMRKMQ NEFNTQRAKM RELYIQKEAE  60
   61 VSQSQQERRQ LQAELDELKT HLMVADLKSQ NELQLRDLKA QEEISSLQQL VQDTIEETAH 120
  121 YKGEVERLRL ELGKYQQIQQ QTMAQQPQAE SSGGIAPQVL NQVKKTLGSV RKLGTDSLNS 180
  181 SFQQDEDTRA SSKGNGKQYA PEEAEMMHSI VEQLQEEMKA LKVKLREQDE QLQAKSASDE 240
  241 SALHKSTSMD VAESACESCS LAEKKTEELG AHINKQQKQV DLLQKQLVES RETLVKEAAL 300
  301 RKDLEDQWQE KREAHKSEVQ SLRDQAKTNE QRLLDMQQKF LETKDEVIKQ IQRVSDDRER 360
  361 VNKQLETLQA DNDFLSGRYL ATSEEIDNQY INLPNTVVEL QELILRQQSE LIQARVSSEY 420
  421 ERQKCTSTED EIQILRAQLE ESNNERRAYK RKMQLDIKSL QDRVTEHLVT VQAYETTKTQ 480
  481 LERKEAELNK QLSECRVEII ELQEANEKYA KTNADYKTKI KTLQEELSTM ETVQKDFVKL 540
  541 SQTLQMSLEE LRHADTEVRW QDDDDVNNCP TCNAYFTVMV RKIHCRHCGH IYCDKCLTKT 600
  601 VPSGPRKRVA RVCDICHTLL TPNTAPYFSQ GQPPQQQQGQ QQQQQSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..307] PSI-BLAST 21.522879 Heavy meromyosin subfragment
    2 View Details [308..498] PSI-BLAST 4.0 No description for 2iw5A was found.
    3 View Details [499..647] PSI-BLAST 7.30103 Eea1; Eea1 homodimerisation domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle