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Protein Overview: Obp57c-PA

General Information:
Name(s) found: Obp57c-PA / FBpp0085604 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • The gene Odorant-binding protein 57c is referred to in FlyBase by the symbol Dmel\Obp57c (CG13421, FBgn0034509). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:16391061..16392296. It has the cytological map location 57A4. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLWLICIL TVSVVSIQSL SLLEETNYVS DCLASNNISQ AEFQELIDRN SSEEDDLENT  60
   61 DRRYKCFIHC LAEKGNLLDT NGYLDVDKID QIEPVSDELR EILYDCKKIY DEEEDHCEYA 120
  121 FKMVTCLTES FEQSDEVTEA GKNTNKLNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 30.154902 Solution structure of Antheraea polyphemus pheromone binding protein (ApolPBP)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • odorant binding
    		•  5.10678105646998 bayes_pls_golite062009
  • pheromone binding
    		•  3.21844632676625 bayes_pls_golite062009
  • binding
    		•  1.84061726818261 bayes_pls_golite062009
  • phenylalkylamine binding
    		•  1.79379891126325 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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