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View Structure Prediction Details

Protein: Obp57c-PA
Organism: Drosophila melanogaster
Length: 149 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp57c-PA.

Description E-value Query
Range
Subject
Range
gi|5081571 - gi|5081571|gb|AAD39447.1|AF133635_1 pheromone binding protein [Ostrinia nubilalis]
134.0 [0..2] [146..3]
gi|5081561 - gi|5081561|gb|AAD39442.1|AF133630_1 pheromone binding protein [Ostrinia furnacalis]
132.0 [0..2] [146..3]
PBP_ANTPO - Pheromone-binding protein OS=Antheraea polyphemus PE=1 SV=1
131.0 [0..5] [146..12]
PBP_MANSE - Pheromone-binding protein OS=Manduca sexta PE=1 SV=1
131.0 [0..1] [146..8]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLWLICIL TVSVVSIQSL SLLEETNYVS DCLASNNISQ AEFQELIDRN SSEEDDLENT  60
   61 DRRYKCFIHC LAEKGNLLDT NGYLDVDKID QIEPVSDELR EILYDCKKIY DEEEDHCEYA 120
  121 FKMVTCLTES FEQSDEVTEA GKNTNKLNE

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Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 1qwvA
Description: Solution structure of Antheraea polyphemus pheromone binding protein (ApolPBP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 5.10678105646998 bayes_pls_golite062009
pheromone binding 3.21844632676625 bayes_pls_golite062009
binding 1.84061726818261 bayes_pls_golite062009
phenylalkylamine binding 1.79379891126325 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle