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Protein Overview: Obp56f-PA

General Information:
Name(s) found: Obp56f-PA / FBpp0085635 [FlyBase]
Description(s) found:
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  • gi|66772851|gb|AAY55736.1| IP02289p [Drosophila melanogaster] [NCBI NR]
  • gi|24655956|ref|NP_725926.1| Odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|21630072|gb|AAM69284.1|AF457146_1 odorant binding protein d; OBP-d [Drosophila melanogaster] [NCBI NR]
  • gi|21626924|gb|AAM68412.1| Odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703766|gb|ABW78011.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703764|gb|ABW78010.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703762|gb|ABW78009.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703760|gb|ABW78008.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703758|gb|ABW78007.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703756|gb|ABW78006.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703754|gb|ABW78005.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703752|gb|ABW78004.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703750|gb|ABW78003.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703748|gb|ABW78002.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703746|gb|ABW78001.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703744|gb|ABW78000.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703742|gb|ABW77999.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703740|gb|ABW77998.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703738|gb|ABW77997.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703736|gb|ABW77996.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703734|gb|ABW77995.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703732|gb|ABW77994.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703730|gb|ABW77993.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703728|gb|ABW77992.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703726|gb|ABW77991.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703724|gb|ABW77990.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703722|gb|ABW77989.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703720|gb|ABW77988.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703718|gb|ABW77987.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703716|gb|ABW77986.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703714|gb|ABW77985.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703712|gb|ABW77984.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703710|gb|ABW77983.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703708|gb|ABW77982.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703706|gb|ABW77981.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703704|gb|ABW77980.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703702|gb|ABW77979.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703700|gb|ABW77978.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703698|gb|ABW77977.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703696|gb|ABW77976.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703694|gb|ABW77975.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703692|gb|ABW77974.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703690|gb|ABW77973.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703688|gb|ABW77972.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703686|gb|ABW77971.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703684|gb|ABW77970.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703682|gb|ABW77969.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703680|gb|ABW77968.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703678|gb|ABW77967.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703676|gb|ABW77966.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703674|gb|ABW77965.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703672|gb|ABW77964.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703670|gb|ABW77963.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • gi|158703668|gb|ABW77962.1| odorant-binding protein 56f [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 56f is referred to in FlyBase by the symbol Dmel\Obp56f (CG30450, FBgn0043533). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15600919..15601481. It has the cytological map location 56E2. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG30450-PA translation from_gene[CG30450 Obp56f FBgn0043533] seq_release:3 mol_weight=14340 cds_boundaries:(2R:14,777,139..14,777,567[+]) aa_length:125 transcript_info:[CG30450-RA seq_release:3] gene_info:[gene symbol:Obp56f FBgn0043533 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MKL2) CG30450-PA (Odorant binding protein d) [DrosMelano7227.FASTAC.txt]
  • CG30450-PA [Drosophila melanogaster]gi|21630072|gb|AAM69284.1| odorant binding protein d; OBP-d [Drosophila melanogaster]gi|24655956|ref|NP_725926.1| CG30450-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(15600924..15600983,15601038..15601355); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412; MD5= [fly-100309-contam.fasta]
  • odorant binding protein d; OBP-d [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP02289p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 56f CG30450-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG30450-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(15600924..15600983,15601038..15601355); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(15600924..15600983,15601038..15601355); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • IP02289p OS=Drosophila melanogaster GN=Obp56f PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(15600924..15600983,15601038..15601355); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412,FlyMine:FBpp0085635,modMine:FBpp0085635; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(19713419..19713478,19713533..19713850); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412,FlyMine:FBpp0085635,modMine:FBpp0085635; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(19713419..19713478,19713533..19713850); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412,FlyMine:FBpp0085635,modMine:FBpp0085635; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0085635 type=protein; loc=2R:join(19713419..19713478,19713533..19713850); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412,FlyMine:FBpp0085635,modMine:FBpp0085635; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(19713419..19713478,19713533..19713850); ID=FBpp0085635; name=Obp56f-PA; parent=FBgn0043533,FBtr0086328; dbxref=FlyBase:FBpp0085635,FlyBase_Annotation_IDs:CG30450-PA,GB_protein:AAM68412.1,REFSEQ:NP_725926,GB_protein:AAM68412,UniProt/TrEMBL:Q7KE32,FlyMine:FBpp0085635,modMine:FBpp0085635; MD5=84cc8557c6ee3552b5c350f2d2bdb38b; length=125; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 125 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFLLFIFI SAIWLQAFCM KSSEKIKACL KRQLGYTITE NTKFDAKEDS LQSKCFYHCL  60
   61 LEVKGVIAND AISSEQPRKV LEKKYGITDT DELEKAEEKC HSIKASGKCE LGYEILKCYQ 120
  121 SITKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 23.0 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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