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View Structure Prediction Details

Protein: Obp56f-PA
Organism: Drosophila melanogaster
Length: 125 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp56f-PA.

Description E-value Query
Range
Subject
Range
gi|2494874, gi|4... - gi|408473|gb|AAA21356.1| OS-E, sp|Q23970|PBP6_DROME Pheromone-binding protein-related protein 6 prec...
113.0 [0..1] [124..2]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFLLFIFI SAIWLQAFCM KSSEKIKACL KRQLGYTITE NTKFDAKEDS LQSKCFYHCL  60
   61 LEVKGVIAND AISSEQPRKV LEKKYGITDT DELEKAEEKC HSIKASGKCE LGYEILKCYQ 120
  121 SITKH

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Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2erbA
Description: AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
Matching Structure (courtesy of the PDB):

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