YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0311727, Obp...

General Information:
Name(s) found: FBpp0311727 [FlyBase]
Obp56d-PA / FBpp0085673 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7302435|gb|AAF57520.1| Odorant-binding protein 56d [Drosophila melanogaster] [NCBI NR]
  • gi|61214493|sp|Q8SY61.2|OB56D_DROME RecName: Full=General odorant-binding protein 56d; Flags: Precursor [NCBI NR]
  • gi|24655948|ref|NP_611444.2| Odorant-binding protein 56d [Drosophila melanogaster] [NCBI NR]
  • gi|21064401|gb|AAM29430.1| RE22207p [Drosophila melanogaster] [NCBI NR]
  • General odorant-binding protein 56d OS=Drosophila melanogaster GN=Obp56d PE=1 SV=2 [Swiss-Prot]
  • type=protein; loc=2R:complement(15590790..15591137,15591208..15591255); ID=FBpp0311727; name=Obp56d-PB; parent=FBgn0034470,FBtr0345676; dbxref=FlyBase:FBpp0311727,FlyBase_Annotation_IDs:CG11218-PB; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r5.56; species=Dmel; [FlyBase]
  • The gene Odorant-binding protein 56d is referred to in FlyBase by the symbol Dmel\Obp56d (CG11218, FBgn0034470). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15590635..15591300. It has the cytological map location 56E2. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: response to pheromone; sensory perception of chemical stimulus; olfactory behavior. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG11218-PA translation from_gene[CG11218 Obp56d FBgn0034470] seq_release:3 mol_weight=14119 cds_boundaries:(2R:14,767,008..14,767,470[-]) aa_length:131 transcript_info:[CG11218-RA seq_release:3] gene_info:[gene symbol:Obp56d FBgn0034470 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V8Y4) CG11218 protein (RE22207p) [DrosMelano7227.FASTAC.txt]
  • (AE003795) CG11218 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11218-PA [Drosophila melanogaster]gi|21064401|gb|AAM29430.1| RE22207p [Drosophila melanogaster]gi|24655948|ref|NP_611444.2| CG11218-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(15590790..15591137,15591208..15591255); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520 [fly-100309-contam.fasta]
  • General odorant-binding protein 56d precursor [nr-271106-contam.fasta]
  • CG11218-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 56d CG11218-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE22207p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(15590790..15591137,15591208..15591255); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(15590790..15591137,15591208..15591255); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:complement(15590790..15591137,15591208..15591255); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520,FlyMine:FBpp0085673,modMine:FBpp0085673; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520,FlyMine:FBpp0085673,modMine:FBpp0085673; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0311727; name=Obp56d-PB; parent=FBgn0034470,FBtr0345676; dbxref=FlyBase:FBpp0311727,FlyBase_Annotation_IDs:CG11218-PB,GB_protein:AHN56414,REFSEQ:NP_001286619; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520,FlyMine:FBpp0085673,modMine:FBpp0085673; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0311727; name=Obp56d-PB; parent=FBgn0034470,FBtr0345676; dbxref=FlyBase:FBpp0311727,FlyBase_Annotation_IDs:CG11218-PB,GB_protein:AHN56414,REFSEQ:NP_001286619; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8SY61, Odorant-binding protein 56d, isoform B OS=Drosophila melanogaster GN=Obp56d PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0085673 type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520,FlyMine:FBpp0085673,modMine:FBpp0085673; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311727 type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0311727; name=Obp56d-PB; parent=FBgn0034470,FBtr0345676; dbxref=FlyBase:FBpp0311727,FlyBase_Annotation_IDs:CG11218-PB,GB_protein:AHN56414,REFSEQ:NP_001286619; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0085673; name=Obp56d-PA; parent=FBgn0034470,FBtr0086477; dbxref=FlyBase:FBpp0085673,FlyBase_Annotation_IDs:CG11218-PA,GB_protein:AAF57520.1,REFSEQ:NP_611444,GB_protein:AAF57520,UniProt/Swiss-Prot:Q8SY61,FlyMine:FBpp0085673,modMine:FBpp0085673; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(19703703..19703750,19703285..19703632)); ID=FBpp0311727; name=Obp56d-PB; parent=FBgn0034470,FBtr0345676; dbxref=FlyBase:FBpp0311727,FlyBase_Annotation_IDs:CG11218-PB,GB_protein:AHN56414,REFSEQ:NP_001286619,UniProt/Swiss-Prot:Q8SY61; MD5=0583488efc3d44eb8da915c04db4cf05; length=131; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [ISS]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    response to pheromone [ISS]
    olfactory behavior [ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLIVLSVI LAISAAELQL SDEQKAVAHA NGALCAQQEG ITKDQAIALR NGNFDDSDPK  60
   61 VKCFANCFLE KIGFLINGEV QPDVVLAKLG PLAGEDAVKA VQAKCDATKG ADKCDTAYQL 120
  121 FECYYKNRAH I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 21.39794 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle