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Protein Overview: FBpp0298350, CG5...

General Information:
Name(s) found: FBpp0298350 [FlyBase]
FBpp0298349 [FlyBase]
FBpp0298348 [FlyBase]
CG5493-PA / FBpp0085892 [FlyBase]
Description(s) found:
Found 37 descriptions.
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  • type=protein; loc=2R:complement(14504449..14504627,14504705..14505242); ID=FBpp0298350; name=CG5493-PD; parent=FBgn0034364,FBtr0307349; dbxref=REFSEQ:NP_001246411,GB_protein:AFH08164,FlyBase:FBpp0298350,FlyBase_Annotation_IDs:CG5493-PD; MD5=024c3ef1f92ccb4202f3c2ee5e49d3d7; length=238; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:complement(14504449..14504627,14504705..14505242); ID=FBpp0298349; name=CG5493-PC; parent=FBgn0034364,FBtr0307348; dbxref=REFSEQ:NP_001246410,GB_protein:AFH08163,FlyBase:FBpp0298349,FlyBase_Annotation_IDs:CG5493-PC; MD5=024c3ef1f92ccb4202f3c2ee5e49d3d7; length=238; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:complement(14504449..14504627,14504705..14505242); ID=FBpp0298348; name=CG5493-PB; parent=FBgn0034364,FBtr0307347; dbxref=REFSEQ:NP_001246409,GB_protein:AFH08162,FlyBase:FBpp0298348,FlyBase_Annotation_IDs:CG5493-PB; MD5=024c3ef1f92ccb4202f3c2ee5e49d3d7; length=238; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5493 (CG5493, FBgn0034364). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:14504199..14505517. It has the cytological map location 55E2. Based on sequence similarity, it is predicted to have molecular function</span>: cysteine dioxygenase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction; L-cysteine metabolic process. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxidation reduction [IEA]
    L-cysteine metabolic process [IEA]
    Molecular Function: cysteine dioxygenase activity [ISS]
    iron ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSKIDTEI EQVDQEKYLR QATSYYQPLE KPLKYGPEVN SLSDLVAALH REFESNYVNI  60
   61 EMVNHLMLSY KSNPREWRKY AKFDRYTYTR NLVDAGNGKF NLLILCWGEG HGSSVHDHAD 120
  121 SHCFMKMLKG DLREKRYEYP NRSARDNGRS HHPDGEIDSR ELVEIGETPI AVNDVAYIND 180
  181 NLGLHRVENP SHSDTSVSLH LYCPPFDTCS VFQDNLKKTT AKVTFWSKYG VRTKQNEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 65.522879 No description for 2ic1A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  1.79942166158385 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  1.78958805205885 bayes_pls_golite062009
  • dioxygenase activity
    		•  0.855730327285165 bayes_pls_golite062009
  • binding
    		•  0.469306358852266 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009
  • protein binding
    		•  0.133891883527478 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle