YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0298350, CG5...
Organism:	Drosophila melanogaster
Length:	238 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0298350, CG5....

Description	E-value	Query Range	Subject Range
gi\|125809151, gi... - gi\|54636178\|gb\|EAL25581.1\| GA18925-PA [Drosophila pseudoobscura], gi\|125809151\|ref\|XP_001361005.1\| G...	294.0	[0..1]	[238..1]
gi\|116128286, gi... - gi\|118784948\|ref\|XP_314041.3\| ENSANGP00000015678 [Anopheles gambiae str. PEST], gi\|116128286\|gb\|EAA0...	279.0	[0..14]	[232..16]
gi\|108876652, gi... - gi\|157116039\|ref\|XP_001658352.1\| cysteine dioxygenase [Aedes aegypti], gi\|108876652\|gb\|EAT40877.1\| c...	269.0	[0..14]	[235..25]
gi\|38051875, gi\|... - gi\|38051875\|gb\|AAH60414.1\| MGC68656 protein [Xenopus laevis], gi\|147904302\|ref\|NP_001083506.1\| hypot...	252.0	[0..40]	[234..10]
gi\|89270946, gi\|... - gi\|89270946\|emb\|CAJ81896.1\| cysteine dioxygenase type I [Xenopus tropicalis], gi\|45360991\|ref\|NP_989...	249.0	[0..40]	[234..10]
CDO1_DANRE - Cysteine dioxygenase type 1 OS=Danio rerio GN=cdo1 PE=2 SV=1	248.0	[0..41]	[234..11]
gi\|62901886 - gi\|62901886\|gb\|AAY18894.1\| cysteine dioxygenase [synthetic construct]	248.0	[0..23]	[234..19]
gi\|109078270, gi... - gi\|109078272\|ref\|XP_001085951.1\| PREDICTED: similar to cysteine dioxygenase, type I isoform 2 [Macac... gi\|90077114 - gi\|90077114\|dbj\|BAE88237.1\| unnamed protein product [Macaca fascicularis]	247.0	[0..40]	[234..10]

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Predicted Domain #1

Region A:
Residues: [1-238]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSKIDTEI EQVDQEKYLR QATSYYQPLE KPLKYGPEVN SLSDLVAALH REFESNYVNI  60
   61 EMVNHLMLSY KSNPREWRKY AKFDRYTYTR NLVDAGNGKF NLLILCWGEG HGSSVHDHAD 120
  121 SHCFMKMLKG DLREKRYEYP NRSARDNGRS HHPDGEIDSR ELVEIGETPI AVNDVAYIND 180
  181 NLGLHRVENP SHSDTSVSLH LYCPPFDTCS VFQDNLKKTT AKVTFWSKYG VRTKQNEQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	65.522879
Match:	2ic1A
Description:	No description for 2ic1A was found.

Predicted functions:

Term	Confidence	Notes
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.79942166158385	bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	1.78958805205885	bayes_pls_golite062009
dioxygenase activity	0.855730327285165	bayes_pls_golite062009
binding	0.469306358852266	bayes_pls_golite062009
catalytic activity	0.401988496917198	bayes_pls_golite062009
protein binding	0.133891883527478	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: