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Protein Overview: gi|28573729, gi|...

General Information:
Name(s) found: gi|28573729 [NCBI NR]
gi|21627030 [NCBI NR]
Description(s) found:
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  • gi|28573729|ref|NP_788403.1| CG30115, isoform D [Drosophila melanogaster] [NCBI NR]
  • gi|21627030|gb|AAF57673.2| CG30115, isoform D [Drosophila melanogaster] [NCBI NR]
  • >CG30115-PD translation from_gene[CG30115 CG30115 FBgn0050115] seq_release:3 mol_weight=176060 cds_boundaries:(2R:13,618,056..13,625,355[-]) aa_length:1593 transcript_info:[CG30115-RD seq_release:3] gene_info:[gene symbol:CG30115 synonyms:[CG18430 CG55 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V8J3) CG30115 protein [DrosMelano7227.FASTAC.txt]
  • CG30115-PD, isoform D [Drosophila melanogaster]gi|28573729|ref|NP_788403.1| CG30115-PD [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • CG30115-PD, isoform D [Drosophila melanogaster] [nr-271106-contam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1593 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of Rho protein signal transduction [IEA]
    Molecular Function: guanyl-nucleotide exchange factor activity [ISS]
    Rho guanyl-nucleotide exchange factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPGAKQLNT SAIPNAAPSA VCPGINHFMQ QNYGKYRGIT SMCAAQAHQH CSTSVAGDRL  60
   61 LGSSTELAPS LLGIYDTLTN SFAAGGVAAA PTATSHESKA SSSGDSTPKR SNSNCSSSSS 120
  121 TGSSTGSCSS VPTSDDQSAS YTLASSSTHL GHQEPPAPLV VAGLRDEPDG AQLSRLVQRR 180
  181 SQESQIHGSS SSIASSGSSR RGSNIRILSP NVHRIITHSD IQPVEAVSAE ALKQHQQQSQ 240
  241 RSPTQGRYIK TGHSGTPPAA GSAPKLKLSH IPLSKITGKL STQSGSELVS TFDSSNEYLN 300
  301 SVAFAAFEKS KPQDEDRTPT NKSVPGTPFH FDGHPFQGRK LTLPRYDSQQ SIKLIEMEQL 360
  361 AATSAQLLHA KPATPGTPAT PTPSATKAKE FVCSEPLSPV DIVDTINFDL VAQHMERLTL 420
  421 ADPGDLDPRA ELIEAVNKTL VNKPLVRSSS AACASTICSS PLLTYARTKS LGAKASTLGG 480
  481 GVPIKLPTAE QLAELEEANK LSAESLDRLT DIKPKFAARL SELARLNNRP LSSSSICSTS 540
  541 SSSSSGSDQL LNGKLMATSY LASVESLAES ENELGDQHHP PAMSVLEKTC LEIVDSERSF 600
  601 VEDLGQVIKG YLQDWKERAC LRVDELQILF ANIEEIYEFN SMLLQRLINT GRDPGRIARC 660
  661 FIDLRDGFDV YTTYCTSYPE AISLLTKLLQ ATHTYSLLAS TQKLLQHRLP LGSYLLKPVQ 720
  721 RILKYHLLLD SLRKHCDVKE VVEAHVIMRQ VAHNIDQVKR KQEQQSRVKE LSGILDGWLG 780
  781 PELTVLGELR QEGLLMEQHN KQRLVLLFAT MLIITKQKED GRLQFKTYIS QNNLMLSEHL 840
  841 PGEPTSFYVI PFDEPRHQIK LTARNRDQKR IWTQHIKGVM LEKLDIPMRA KELVYQLGNE 900
  901 EDRTPDRSTW KWSLHSGSNS TPTYLERRNA CRRSEIRQRN SKFKRKTVAN SSSFDSFNES 960
  961 LEQEEESISQ AKPSKPLARN NSLDDTALQK LAAAMRYRKR DAAVKEETKT PVKEPCKCDQ1020
 1021 DAKQDERIEP CSCILRDQRS RSAKSQSPVF SYKALKERSK SVPRIGGFSL DEEAEREREQ1080
 1081 DEDSAASLRG SKPDLSERKT KGKGFFEVKQ YNHKTMPKKI ANLKKQRSST TKSCSRFYMD1140
 1141 LSEFDSSSST VLKITESTEE LRPDGEIELA QEAATLDEST QDQYYSPDHE TELLSPAEKS1200
 1201 KRDAQIVLDL LKNSKEFERI YNKQQKRRES PVSPVSPDIS RGPILPPPRP PSRSPPPLEL1260
 1261 EEQEKKPVEE VDSVSEEPIY ETLLRNVHVP YKFSPVLGRA KSSQILKKRS KTAPAASRPE1320
 1321 SDYVTLVYSP EGVLQRVGEE VVQRDSCSSS TTSTSSNGSG STLKRDSQST VINLLMEAAQ1380
 1381 EHESRPLPKN SVSGSESSLL PRALKSIDNL SMAFGRSNRP PERRVSDVSE MCRQSVLHRQ1440
 1441 GSEAVGERMA HVDYADPKAL FGLGVLNHSE RDSVFSLTSS SSDSMCEQQR KRSGVGATFE1500
 1501 YEQQVEDSLE NDFRDSAIYS DDNEKRSGDY DVHLRRPSSP PPPPPPLGPR PHQPPQIAPK1560
 1561 PSKDQLIQQR SGVIVCQSAS RSWVLQQIEN FNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] MSA 4.245994 View MSA. No confident structure predictions are available.
    2 View Details [167..350] MSA 4.285991 View MSA. No confident structure predictions are available.
    3 View Details [351..545] deduced N/A No confident structure predictions are available.
    4 View Details [546..951] PSI-BLAST 78.39794 No description for 2dfkA was found.
    5 View Details [952..1024] deduced N/A No confident structure predictions are available.
    6 View Details [1025..1216] deduced N/A No confident structure predictions are available.
    7 View Details [1217..1310] deduced N/A No confident structure predictions are available.
    8 View Details [1311..1394] deduced N/A No confident structure predictions are available.
    9 View Details [1395..1593] MSA 1.053972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle