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Protein Overview: swi2-PA

General Information:
Name(s) found: swi2-PA / FBpp0086049 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene swi2 is referred to in FlyBase by the symbol Dmel\swi2 (CG14485, FBgn0034262). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13577779..13582856. It has the cytological map location 54D5-54D6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: pupariation; response to ecdysone; intracellular signaling cascade. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 499 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [ISS]
    pupariation [ISS]
    response to ecdysone [ISS]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSGVFQKRP KAAETISLFC MILIRLSRAA DDSHETSTLL ATITTITTEI IPMPDSGRSC  60
   61 FGWSSAPEAA GGNCSRSNRN GTLKCYGGMN NLAALNQSGK LSRVQPALEM LLCGWPKDGL 120
  121 NHFRDLQKLP RLRSLTIEYS GFTEFKFDFP EMLELHTINI SWTNLSYISS RTFKRVHPLK 180
  181 VLDLRWNQLI QLDGPLLLPR NFEQLYLAGN PWNCTRNFKW LLLQPEKGRL VVDRDELICT 240
  241 DRKYKERQML MVMHYKLELK RQCQSHEDLR NCTCLMHHIL PKTHIPLYTV NCSHLQFHRL 300
  301 PDFLPDNTTT LVINDNMISD INPLRDNPHY RHVVDMQLEN NQISNVDNLE DTYWLQNFRL 360
  361 LNLRGNNLRK LHVYALDNAL DDNENANLLL LSRNPWHCTC KFGSRMRELL TKYKDIVRDA 420
  421 WNVSCTYRLD DDQLLAKVLT LSRQEMCNLS VEGGTQIHPI DWLNGVLASL IFLILGKLAY 480
  481 DYYYYKYYGR VPWIVMKMP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..499] PSI-BLAST 31.522879 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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