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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: swi2-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSGVFQKRP KAAETISLFC MILIRLSRAA DDSHETSTLL ATITTITTEI IPMPDSGRSC  60
   61 FGWSSAPEAA GGNCSRSNRN GTLKCYGGMN NLAALNQSGK LSRVQPALEM LLCGWPKDGL 120
  121 NHFRDLQKLP RLRSLTIEYS GFTEFKFDFP EMLELHTINI SWTNLSYISS RTFKRVHPLK 180
  181 VLDLRWNQLI QLDGPLLLPR NFEQLYLAGN PWNCTRNFKW LLLQPEKGRL VVDRDELICT 240
  241 DRKYKERQML MVMHYKLELK RQCQSHEDLR NCTCLMHHIL PKTHIPLYTV NCSHLQFHRL 300
  301 PDFLPDNTTT LVINDNMISD INPLRDNPHY RHVVDMQLEN NQISNVDNLE DTYWLQNFRL 360
  361 LNLRGNNLRK LHVYALDNAL DDNENANLLL LSRNPWHCTC KFGSRMRELL TKYKDIVRDA 420
  421 WNVSCTYRLD DDQLLAKVLT LSRQEMCNLS VEGGTQIHPI DWLNGVLASL IFLILGKLAY 480
  481 DYYYYKYYGR VPWIVMKMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle