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Protein Overview: Sip1-PA

General Information:
Name(s) found: Sip1-PA / FBpp0086065 [FlyBase]
Description(s) found:
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  • gi|7302804|gb|AAF57879.1| SRY interacting protein 1 [Drosophila melanogaster] [NCBI NR]
  • gi|17933696|ref|NP_524712.1| SRY interacting protein 1 [Drosophila melanogaster] [NCBI NR]
  • gi|15010434|gb|AAK77265.1| GH04176p [Drosophila melanogaster] [NCBI NR]
  • The gene SRY interacting protein 1 is referred to in FlyBase by the symbol Dmel\Sip1 (CG10939, FBgn0010620). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13282101..13292678. It has the cytological map location 54B6-54B7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior. 10 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG10939-PA translation from_gene[CG10939 Sip1 FBgn0010620] seq_release:3 mol_weight=30689 cds_boundaries:(2R:12,467,622..12,468,509[+]) aa_length:296 transcript_info:[CG10939-RA seq_release:3] gene_info:[gene symbol:Sip1 FBgn0010620 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V805) CG10939 protein (GH04176P) [DrosMelano7227.FASTAC.txt]
  • (AE003803) CG10939 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG10939-PA [Drosophila melanogaster]gi|15010434|gb|AAK77265.1| GH04176p [Drosophila melanogaster]gi|17933696|ref|NP_524712.1| CG10939-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:13291402..13292292; ID=FBpp0086065; name=Sip1-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879; MD5=f1f5e8d89cdd24b5f98be7ed241 [fly-100309-contam.fasta]
  • GH04176p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG10939-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • SRY interacting protein 1 CG10939-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:13291402..13292292; ID=FBpp0086065; name=Sip1-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:13291402..13292292; ID=FBpp0086065; name=Sip1-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GH04176p OS=Drosophila melanogaster GN=Sip1 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:13291402..13292292; ID=FBpp0086065; name=Sip1-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879,FlyMine:FBpp0086065,modMine:FBpp0086065; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • GH04176p OS=Drosophila melanogaster GN=Sip1 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2R:17403897..17404787; ID=FBpp0086065; name=Sip1-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879,FlyMine:FBpp0086065,modMine:FBpp0086065; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:17403897..17404787; ID=FBpp0086065; name=CG10939-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879,FlyMine:FBpp0086065,modMine:FBpp0086065; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0086065 type=protein; loc=2R:17403897..17404787; ID=FBpp0086065; name=CG10939-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879,FlyMine:FBpp0086065,modMine:FBpp0086065; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:17403897..17404787; ID=FBpp0086065; name=CG10939-PA; parent=FBgn0010620,FBtr0086909; dbxref=FlyBase:FBpp0086065,FlyBase_Annotation_IDs:CG10939-PA,GB_protein:AAF57879.1,REFSEQ:NP_524712,GB_protein:AAF57879,UniProt/TrEMBL:Q7K5M6,FlyMine:FBpp0086065,modMine:FBpp0086065; MD5=f1f5e8d89cdd24b5f98be7ed241b0009; length=296; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: olfactory behavior [IMP]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPTSPKTP TPPTLPPGVT KTCHIVKRPD FDGYGFNLHS EKVKPGQFIG KVDADSPAEA  60
   61 AGLKEGDRIL EVNGVSIGSE THKQVVARIK AIANEVRLLL IDVDGKALEV KPASPPAAAC 120
  121 NGNGSASQNG YEGTKQEMPG ASANISSISM VSTKRSSNAS SIQSGSTMNA SDLDVVDRGI 180
  181 PAVAAPVAIT PPPVQNGSKP SSPINNNTLM STPPPPSATK AGINNNGSVY NTNGNGTNGM 240
  241 TTPTTPPPPT SGYKAGTLHL PMTAAEMRAK LASKKKYDPK NESVDLKKKF DIIQKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..296] PSI-BLAST 38.0 Photosystem II D1 C-terminal processing protease

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.06555339437525 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle