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Protein Overview: gi|28573498, gi|...

General Information:
Name(s) found: gi|28573498 [NCBI NR]
gi|28380767 [NCBI NR]
gi|21429090 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|28573498|ref|NP_611185.2| CG6967, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|28380767|gb|AAF57908.2| CG6967, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21429090|gb|AAM50264.1| LD34829p [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 825 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQTEDLKLI DRQLSKIARK RYKWQEKNKT TFVLCTHGMV NDDDKVKQCN PEEKQQQLLS  60
   61 MMRELPYYPP SNEMIEANTN QDLSANNSVF GDFMKTKRLE FYNVCSVMQT LLTIDDLSNM 120
  121 ELYAQLIQSD VPVQRVSKLT YKITFKSTPV NAEDFVAPNL DQVVLVPKAS LLASPLPKQL 180
  181 VLALLPHPHE DLEPGDPMLR HVASVDKVSS TTVHVRFSRK HKAVLSGQRF YAIIRSRRLT 240
  241 IRYMYRALNL LQESPLVRRY LFPFPSWLTQ LVDNSQIKVC CDGHLPNWMQ GRPQEPATPT 300
  301 SLSLLNSTIY SNAEQLEAVQ RIVAGPSTQG PYILFGPPGT GKTTTIVEAI LQLRLQQPQS 360
  361 RILVTAGSNS ACDTIALKLC EYIESNIRLQ EHFAQQKLPE PDHQLIRVYS RSIYEKGFAS 420
  421 VPSLLLKNSN CSKSIYDHIK ASRIVKYGII VATLCTVARL VTDTLGRYNF FTHIFIDEAG 480
  481 ASTEPEALIG IMGIKQTADC HVILSGDHKQ LGAVIKSNRA ASLGLSRSLM ERLLQSDCYK 540
  541 SDENGNYDRN RQMRLCRNYR SHPQIVRLFN ELYYNGELKA QAPAMDVNLA ANWSVLTNPQ 600
  601 FPIIFQATHG VTNREQNSTS SYNNLEAEVI CWYVKRLIND RVVGQEDVGI VAPYTAQGKL 660
  661 VTKLLQSKGY PNVEVGSVET YQGREKTIII ASLVKSFTNM GFMCNPRRVN VLLSRAKALL 720
  721 ILVGNPVTLR HHSDFKFVIN ECKKHGTYLL KKRDSGQRPH ILIKADESNE ESSSEPEDED 780
  781 DKLIPSYARM QQHTDAAIHK IKAHPTNEND QLANSFKISM SKLSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] PSI-BLAST 17.522879 No description for 2iykA was found.
    2 View Details [68..757] PSI-BLAST 97.522879 No description for 2gjkA was found.
    3 View Details [758..825] PSI-BLAST 81.522879 No description for 2is1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle